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Protein Overview: gi|238478643, gi...

General Information:
Name(s) found: gi|9295726 [NCBI NR]
gi|25403271 [NCBI NR]
gi|238478643 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9295726|gb|AAF87032.1|AC006535_10 T24P13.16 [Arabidopsis thaliana] [NCBI NR]
  • pir||D86394 protein T24P13.16 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|238478643|ref|NP_001154369.1| myb family transcription factor (MYB117) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 359 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription [TAS]
    organ boundary specification between lateral organs and the meristem [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE  60
   61 ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH WRPAEDVKLK ELVSIYGPQN 120
  121 WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP 180
  181 GRTDNSVKNH WHVVMARKYR EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN 240
  241 HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN 300
  301 VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF FDFLGLGTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..260] PSI-BLAST 44.0 c-Myb, DNA-binding domain
    2 View Details [261..359] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle