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Protein Overview: gi|15219547, gi|...

General Information:
Name(s) found: gi|25406294 [NCBI NR]
gi|15219547 [NCBI NR]
gi|12324219 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||B96765 protein lipid transfer protein F25P22.20 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219547|ref|NP_177519.1| protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324219|gb|AAG52085.1|AC012679_23 putative lipid transfer protein; 71816-72112 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 98 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: lipid transport [IEA][ISS]
    Molecular Function: lipid binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGSCTKPVF FTCTILLILI VAQENRVAAV DPCNPAQLSP CLETIMKGSE PSDLCCSKVK  60
   61 EQQHCICQYL KNPNFKSFLN SPNAKIIATD CHCPYPKC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] PSI-BLAST 20.09691 Non-specific lipid-transfer protein homologue (ns-LTP2)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.619696930993462 bayes_pls_golite062009
  • lipid binding
    		•  0.426912810837979 bayes_pls_golite062009
  • transporter activity
    		•  0.166266607468725 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle