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Protein Overview: gi|15232238, gi|...

General Information:
Name(s) found: gi|6513933 [NCBI NR]
gi|15232238 [NCBI NR]
gi|145331728 [NCBI NR]
Description(s) found:
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  • gi|6513933|gb|AAF14837.1|AC011664_19 putative dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • gi|15232238|ref|NP_186847.1| short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|145331728|ref|NP_001078091.1| short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SG99) Putative dehydrogenase [athaliana3702.FASTAC.txt]
  • putative dehydrogenase [Arabidopsis thaliana]gi|15232238|ref|NP_186847.1| short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Short-chain dehydrogenase/reductase (SDR) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr3:327754-328840 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative dehydrogenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:327747-328833 REVERSE LENGTH=266 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative dehydrogenase OS=Arabidopsis thaliana GN=F1C9.24 PE=4 SV=1 [ARATH-contam.fasta]
  • Isoform of Q9SGI2, Putative dehydrogenase OS=Arabidopsis thaliana GN=F1C9.24 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    Biological Process: metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    oxidoreductase activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENPAKRVLM TSNGDEVSRN IAFHLAKHGC KLVMMGNEGS LRSIVDKIRD SIEGAFPADV  60
   61 IALDMESDSE VAFHAAVQKA WELSGHFDAF LNSYTYQGKV QDILQVSQDE FHRITKINLT 120
  121 APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRASAMSL 180
  181 GKHKIRVNMI SRGLHLDDEY TASVGRDRAQ KLVKDAAPLG QWLNPDTDLY STVIYLISDG 240
  241 SRFMTGTTVL VDGAQSLTRP RLKSYM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] PSI-BLAST 62.69897 No description for 2p68A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle