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Protein Overview: CDF3_ARATH

General Information:
Name(s) found: CDF3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6522533|emb|CAB61976.1| H-protein promoter binding factor-2a [Arabidopsis thaliana] [NCBI NR]
  • gi|55584038|sp|Q8LFV3.2|DOF33_ARATH RecName: Full=Dof zinc finger protein DOF3.3; Short=AtDOF3.3; AltName: Full=H-protein promoter-binding factor 2a [NCBI NR]
  • gi|3386546|gb|AAC28390.1| H-protein promoter binding factor-2a [Arabidopsis thaliana] [NCBI NR]
  • gi|22136158|gb|AAM91157.1| H-protein promoter binding factor-2a [Arabidopsis thaliana] [NCBI NR]
  • gi|17473786|gb|AAL38328.1| H-protein promoter binding factor-2a [Arabidopsis thaliana] [NCBI NR]
  • gi|15232818|ref|NP_190334.1| CDF3 (CYCLING DOF FACTOR 3); DNA binding / protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T45710 H-protein promoter binding factor-2a [imported] - Arabidopsis thaliana [NCBI NR]
  • Dof zinc finger protein DOF3.3 OS=Arabidopsis thaliana GN=DOF3.3 PE=1 SV=2 [Swiss-Prot]
  • Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2 [Swiss-Prot]
  • (O81600) H-protein promoter binding factor-2a [athaliana3702.FASTAC.txt]
  • H-protein promoter binding factor-2a [Arabidopsis thaliana]gi|6522533|emb|CAB61976.1| H-protein promoter binding factor-2a [Arabidopsis thaliana]gi|17473786|gb|AAL38328.1| H-protein promoter binding factor-2a [Arabidopsis thaliana]gi|11357324|pir||T457 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dof zinc finger protein DOF3.3 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CDF3 | CDF3 (CYCLING DOF FACTOR 3); DNA binding / protein binding / transcription factor | chr3:17515261-17516949 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • H-protein promoter binding factor-2a [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Dof zinc finger protein DOF3.3 (AtDOF3.3) (H-protein promoter-binding factor 2a) [nr-271106-contam.fasta]
  • | Symbols: CDF3 | cycling DOF factor 3 | chr3:17504276-17505964 REVERSE LENGTH=448 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: [NOT]regulation of timing of transition from vegetative to reproductive phase [IMP]
    regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC  60
   61 NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG KTLKKPTKIL PCPRCKSMET 120
  121 KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA 180
  181 ARLDPGLQAN TRVLSFGLEA QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR 240
  241 VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN 300
  301 PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK 360
  361 DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN EAMCKAGGMF KGFDHKTKMY 420
  421 NNDKAENSPV LSANPAALSR SHNFHEQI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] FFAS03 1.17 Eea1; Eea1 homodimerisation domain
    2 View Details [166..358] MSA 23.188997 View MSA. No confident structure predictions are available.
    3 View Details [359..448] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle