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Protein Overview: ZHD3_ARATH

General Information:
Name(s) found: ZHD3_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T00609 hypothetical protein At2g02540 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|55740541|gb|AAV63863.1| hypothetical protein At2g02540 [Arabidopsis thaliana] [NCBI NR]
  • gi|3184285|gb|AAC18932.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15226993|ref|NP_178358.1| ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21); DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1 [Swiss-Prot]
  • (O64722) At2g02540 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|7487811|pir||T00609 hypothetical protein At2g02540 [imported] - Arabidopsis thalianagi|15226993|ref|NP_178358.1| zinc finger homeobox family protein / ZF-HD homeobox family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Zinc finger homeobox family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATHB21, ZFHD4 | ATHB21/ZFHD4 (ZINC FINGER HOMEODOMAIN 4); DNA binding / transcription factor | chr2:684301-685233 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein At2g02540 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATHB21, ZFHD4, HB21, ZHD3 | homeobox protein 21 | chr2:684302-685234 FORWARD LENGTH=310 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Homeobox protein 21 OS=Arabidopsis thaliana GN=HB21 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: [NOT]positive regulation of transcription [IPI]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    [NOT]transcription activator activity [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH  60
   61 DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG NAIDGCGEFM PSGEEGSIEA 120
  121 LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI 180
  181 GVTTAGSNSE SEDLMEEEGG GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF 240
  241 AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND 300
  301 ITENLASTNP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] deduced N/A No confident structure predictions are available.
    2 View Details [82..208] Pfam 38.769551 No description for PF04770.2 was found. No confident structure predictions are available.
    3 View Details [209..310] PSI-BLAST 28.522879 DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle