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Protein Overview: APS3_ARATH

General Information:
Name(s) found: APS3_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||E71409 sulfate adenylyltransferase (EC 2.7.7.4) precursor (clone APS3) - Arabidopsis thaliana [NCBI NR]
  • gi|7268174|emb|CAB78510.1| ATP-sulfurylase [Arabidopsis thaliana] [NCBI NR]
  • gi|2244824|emb|CAB10247.1| ATP-sulfurylase [Arabidopsis thaliana] [NCBI NR]
  • gi|15233537|ref|NP_193204.1| APS3; sulfate adenylyltransferase (ATP) [Arabidopsis thaliana] [NCBI NR]
  • ATP-sulfurylase 3, chloroplastic OS=Arabidopsis thaliana GN=APS3 PE=1 SV=1 [Swiss-Prot]
  • (O23324) ATP-sulfurylase [athaliana3702.FASTAC.txt]
  • ATP-sulfurylase [Arabidopsis thaliana]gi|2244824|emb|CAB10247.1| ATP-sulfurylase [Arabidopsis thaliana]gi|15233537|ref|NP_193204.1| sulfate adenylyltransferase 3 / ATP-sulfurylase 3 (APS3) [Arabidopsis thaliana]gi|7438192|pir||E71409 sulfate adenylyltr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Sulfate adenylyltransferase 3 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: APS3 | APS3 (ATP sulfurylase 2); sulfate adenylyltransferase (ATP) | chr4:8413438-8415306 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • APS3; sulfate adenylyltransferase (ATP) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP-sulfurylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: APS3 | Pseudouridine synthase/archaeosine transglycosylase-like family protein | chr4:8413443-8415311 REVERSE LENGTH=465 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [NAS]
    Biological Process: sulfate assimilation [ISS][TAS]
    Molecular Function: sulfate adenylyltransferase (ATP) activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMSTVFPK PTSFISQPLT KSHKSDSVTT SISFPSNSKT RSLRTISVRA GLIEPDGGKL  60
   61 VDLVVPEPRR REKKHEAADL PRVRLTAIDL QWMHVLSEGW ASPLRGFMRE SEFLQTLHFN 120
  121 LLNLDDGSVV NMSVPIVLAI DDQQKALIGE SKRVSLVDSD DNPIAILNDI EIYKHPKEER 180
  181 IARTWGTTAP GLPYVEEAIT NAGDWLIGGD LEVLEPVKYN DGLDRFRLSP FELRKELEKR 240
  241 GADAVFAFQL RNPVHNGHAL LMTDTRRRLL EMGYKNPILL LHPLGGFTKA DDVPLSWRMK 300
  301 QHEKVLEDGV LDPETTVVSI FPSPMLYAGP TEVQWHAKAR INAGANFYIV GRDPAGMGHP 360
  361 VEKRDLYDAD HGKKVLSMAP GLERLNILPF RVAAYDKTQG KMAFFDPSRA QDFLFISGTK 420
  421 MRALAKNREN PPDGFMCPGG WKVLVDYYDS LTLTGNTKLP EKIPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..465] PSI-BLAST 169.0 The crystal structure of human 3'-phosphoadenosine-5'-phosphosulfate synthetase 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • ligase activity
    		•  1.01418518097034 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.922796692287058 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.922796692287058 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.911887616296893 bayes_pls_golite062009
  • adenylyltransferase activity
    		•  0.19674866587635 bayes_pls_golite062009
  • sulfate adenylyltransferase activity
    		•  0.131596240193754 bayes_pls_golite062009
  • sulfate adenylyltransferase (ATP) activity
    		•  0.118324944285084 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle