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Protein Overview: SWI3C_ARATH

General Information:
Name(s) found: SWI3C_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 807 amino acids

    Gene Ontology:
    Cellular Component: SWI/SNF complex [ISS]
    chromatin remodeling complex [ISS]
    Biological Process: chromatin remodeling [ISS]
    Molecular Function: DNA binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPASEDRRGK WKRKKRGGLS AARKPKQEEE DMEEEDEENN NNNNEEMDDV ENADELQQNG  60
   61 GATPDPGLGI GEVVEDSGSR ISDFPAVVKR VVIRPHASVM AVVAAERAGL IGETRGQGSL 120
  121 PALENISFGQ LQALSTVPAD SLDLERSDGS SSAYVISPPP IMDGEGVVKR FGDLVHVLPM 180
  181 HSDWFAPNTV DRLERQVVPQ FFSGKSPNHT PESYMEFRNA IVSKYVENPE KTLTISDCQG 240
  241 LVDGVDIEDF ARVFRFLDHW GIINYCATAQ SHPGPLRDVS DVREDTNGEV NVPSAALTSI 300
  301 DSLIKFDKPN CRHKGGEVYS SLPSLDGDSP DLDIRIREHL CDSHCNHCSR PLPTVYFQSQ 360
  361 KKGDILLCCD CFHHGRFVVG HSCLDFVRVD PMKFYGDQDG DNWTDQETLL LLEAVELYNE 420
  421 NWVQIADHVG SKSKAQCILH FLRLPVEDGL LDNVEVSGVT NTENPTNGYD HKGTDSNGDL 480
  481 PGYSEQGSDT EIKLPFVKSP NPVMALVAFL ASAVGPRVAA SCAHESLSVL SEDDRMKSEG 540
  541 MQGKEASLLD GENQQQDGAH KTSSQNGAEA QTPLPQDKVM AAFRAGLSAA ATKAKLFADH 600
  601 EEREIQRLSA NIVNHQLKRM ELKLKQFAEI ETLLMKECEQ VEKTRQRFSA ERARMLSARF 660
  661 GSPGGISPQT NNLQGMSLST GGNNINSLMH QQHQQQQASA TSQPSIIPGF SNNPQVQAQM 720
  721 HFMARQQQQQ QQQQQQQQQA FSFGPRLPLN AIQTNAGSTA SPNVMFGNNQ LNNPAAAGAA 780
  781 SINQPSFSHP MVRSSTGSGS GSGLGLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] deduced N/A No confident structure predictions are available.
    2 View Details [169..536] PSI-BLAST 51.221849 No description for 2dw4A was found.
    3 View Details [537..671] deduced N/A No confident structure predictions are available.
    4 View Details [672..807] MSA 5.206996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle