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Protein Overview: gi|25402681, gi|...

General Information:
Name(s) found: gi|4835785 [NCBI NR]
gi|25402681 [NCBI NR]
gi|156891690 [NCBI NR]
gi|15221083 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|4835785|gb|AAD30251.1|AC007296_12 Strong similarity to gb|X95759 soluble-starch-synthase precursor (SSIII) from Solanum tuberosum. [Arabidopsis thaliana] [NCBI NR]
  • pir||H86250 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|156891690|gb|ABU96740.1| chloroplast starch synthase III [Arabidopsis thaliana] [NCBI NR]
  • gi|15221083|ref|NP_172637.1| ATSS3 (starch synthase 3); starch synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1025 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: starch biosynthetic process [IMP]
    Molecular Function: transferase activity, transferring glycosyl groups [ISS]
    starch synthase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASGPKSSG PRGFGRRTTV GSAQKRTQKK NGEKDSNATS TATNEVSGIS KLPAAKVDVQ  60
   61 KQSSVVLNER NVLDRSDIED GSDRLDKKTT DDDDLLEQKL KLERENLRRK EIETLAAENL 120
  121 ARGDRMFVYP VIVKPDEDIE VFLNRNLSTL NNEPDVLIMG AFNEWRWKSF TRRLEKTWIH 180
  181 EDWLSCLLHI PKEAYKMDFV FFNGQSVYDN NDSKDFCVEI KGGMDKVDFE NFLLEEKLRE 240
  241 QEKLAKEEAE RERQKEEKRR IEAQKAAIEA DRAQAKAETQ KRRELLQPAI KKAVVSAENV 300
  301 WYIEPSDFKA EDTVKLYYNK RSGPLTNSKE LWLHGGFNNW VDGLSIVVKL VNAELKDVDP 360
  361 KSGNWWFAEV VVPGGALVID WVFADGPPKG AFLYDNNGYQ DFHALVPQKL PEELYWLEEE 420
  421 NMIFRKLQED RRLKEEVMRA KMEKTARLKA ETKERTLKKF LLSQKDVVYT EPLEIQAGNP 480
  481 VTVLYNPANT VLNGKPEVWF RGSFNRWTHR LGPLPPQKME ATDDESSHVK TTAKVPLDAY 540
  541 MMDFVFSEKE DGGIFDNKNG LDYHLPVVGG ISKEPPLHIV HIAVEMAPIA KVGGLGDVVT 600
  601 SLSRAVQELN HNVDIVFPKY DCIKHNFVKD LQFNRSYHWG GTEIKVWHGK VEGLSVYFLD 660
  661 PQNGLFQRGC VYGCADDAGR FGFFCHAALE FLLQGGFHPD ILHCHDWSSA PVSWLFKDHY 720
  721 TQYGLIKTRI VFTIHNLEFG ANAIGKAMTF ADKATTVSPT YAKEVAGNSV ISAHLYKFHG 780
  781 IINGIDPDIW DPYNDNFIPV PYTSENVVEG KRAAKEELQN RLGLKSADFP VVGIITRLTH 840
  841 QKGIHLIKHA IWRTLERNGQ VVLLGSAPDP RIQNDFVNLA NQLHSSHGDR ARLVLTYDEP 900
  901 LSHLIYAGAD FILVPSIFEP CGLTQLIAMR YGAVPVVRKT GGLFDTVFDV DHDKERAQAQ 960
  961 VLEPNGFSFD GADAPGVDYA LNRAISAWYD GREWFNSLCK TVMEQDWSWN RPALEYLELY1020
 1021 HSARK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..393] PSI-BLAST 17.522879 Heavy meromyosin subfragment
    2 View Details [394..575] Pfam 82.537602 No description for PF07036.3 was found. No confident structure predictions are available.
    3 View Details [576..1025] PSI-BLAST 101.0 No description for 2qzsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle