YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ABC1_ARATH

General Information:
Name(s) found: ABC1_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • pir||T02007 ABC1 protein homolog T15B16.14 - Arabidopsis thaliana [NCBI NR]
  • gi|7268209|emb|CAB77736.1| putative ABC transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|3859609|gb|AAC72875.1| Arabidopsis thaliana ABC1 protein (GB:AJ001158) [NCBI NR]
  • gi|15234260|ref|NP_192075.1| ATABC1 (ARABIDOPSIS THALIANA ABC TRANSPORTER 1); transporter [Arabidopsis thaliana] [NCBI NR]
  • Protein ABC transporter 1, mitochondrial OS=Arabidopsis thaliana GN=ABC1 PE=2 SV=1 [Swiss-Prot]
  • (Q9SBB2) Hypothetical protein At4g01660 [athaliana3702.FASTAC.txt]
  • putative ABC transporter [Arabidopsis thaliana]gi|3859609|gb|AAC72875.1| Arabidopsis thaliana ABC1 protein (GB:AJ001158)gi|7484785|pir||T02007 ABC1 protein homolog T15B16.14 - Arabidopsis thalianagi|15234260|ref|NP_192075.1| ABC1 family protein [Arabid [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ABC1 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATATH10, ABC1At | ABC1At (ARABIDOPSIS THALIANA ABC TRANSPORTER 1) | chr4:708652-711095 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Arabidopsis thaliana ABC1 protein (GB:AJ001158) [nr-271106-contam.fasta]
  • ABC1At (ARABIDOPSIS THALIANA ABC TRANSPORTER 1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ABC transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATABC1, ATATH10, ABC1 | ABC transporter 1 | chr4:708652-711095 FORWARD LENGTH=623 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ABC transporter 1 OS=Arabidopsis thaliana GN=T15B16.14 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 623 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial respiratory chain [IGI]
    Biological Process: cytochrome complex assembly [IGI]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSWSKSFTR LVNGVSLVAK EIYNQSPELQ RARNGDLEGL ITSSGKKALV AATDLVGLTS  60
   61 GKLRELSIRR SKEPSVVYFD EGDNKDNVVA TPEVRSVNTK PSEKIVDSKV LRNEFSDEVK 120
  121 NSNREGEIKV SGVEAGEIIG VRAVESGTVT EASSPSEVVP PVKRRRPRER KVPSTPMARA 180
  181 YGFFNLGAAL AWGAVKESTY RMVNGTPMTP DNQPALSSLM SKENAERLAL GLCEMRGAAL 240
  241 KVGQMLSIQD ESLVPAPILN ALEYVRQGAD VMPRSQLNPV LDAELGSNWQ SKLTSFDYEP 300
  301 LAAASIGQVH RAVTKDGLEV AMKIQYPGVA NSIESDIENV RRLLNYTNLI PKGLFLDRAI 360
  361 KVAKEELAQE CDYEIEAVSQ KRFRDLLSDT PGFYVPLVVD ETSSKKILTT ELISGIPIDK 420
  421 VALLDQKTRD YVGRKMLELT LKELFVFRFM QTDPNWGNFL YNEATKTINL IDFGAARDYP 480
  481 KKFVDDYLRM VMACAEKDSE GVIEMSRRLG FLTGDESDVM LDAHVQAGFI VGLPFAEPGG 540
  541 YAFRTNNIAS SISNLGATML KHRLSPPPDE AYSLHRKLSG AFLACIKLGA TVPCRDLLLQ 600
  601 VYNKYQFDDE PQDPVVATSS VSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..171] deduced N/A No confident structure predictions are available.
    2 View Details [172..623] PSI-BLAST 30.154902 No description for 2acxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle