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Protein Overview: RH14_ARATH

General Information:
Name(s) found: RH14_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79295442|ref|NP_001030619.1| DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase [Arabidopsis thaliana] [NCBI NR]
  • gi|6016713|gb|AAF01539.1|AC009325_9 RNA helicase, DRH1 [Arabidopsis thaliana] [NCBI NR]
  • gi|42572223|ref|NP_974206.1| DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase [Arabidopsis thaliana] [NCBI NR]
  • gi|3149952|dbj|BAA28347.1| DRH1 [Arabidopsis thaliana] [NCBI NR]
  • gi|30678365|ref|NP_850492.1| DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase [Arabidopsis thaliana] [NCBI NR]
  • pir||T52137 ATP-dependent DEAD box RNA helicase DRH1 [validated] - Arabidopsis thaliana [NCBI NR]
  • gi|108861885|sp|Q8H136.2|RH14_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 14 [NCBI NR]
  • DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana GN=RH14 PE=1 SV=2 [Swiss-Prot]
  • (O64430) DRH1 [athaliana3702.FASTAC.txt]
  • RNA helicase, DRH1 [Arabidopsis thaliana]gi|42572223|ref|NP_974206.1| DEAD box RNA helicase (DRH1) [Arabidopsis thaliana]gi|30678365|ref|NP_850492.1| DEAD box RNA helicase (DRH1) [Arabidopsis thaliana]gi|25290843|pir||T52137 ATP-dependent DEAD box RNA [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DEAD box RNA helicase (DRH1) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATDRH1, DRH1 | DRH1 (DEAD box RNA helicase 1) | chr3:213084-216149 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DRH1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RNA helicase, DRH1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DEAD-box ATP-dependent RNA helicase 14 [nr-271106-contam.fasta]
  • | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | chr3:213077-216142 REVERSE LENGTH=619 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: ATPase activity [IDA]
    ATP-dependent RNA helicase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAAASVV RYAPEDHTLP KPWKGLIDDR TGYLYFWNPE TNVTQYEKPT PSLPPKFSPA  60
   61 VSVSSSVQVQ QTDAYAPPKD DDKYSRGSER VSRFSEGGRS GPPYSNGAAN GVGDSAYGAA 120
  121 STRVPLPSSA PASELSPEAY SRRHEITVSG GQVPPPLMSF EATGFPPELL REVLSAGFSA 180
  181 PTPIQAQSWP IAMQGRDIVA IAKTGSGKTL GYLIPGFLHL QRIRNDSRMG PTILVLSPTR 240
  241 ELATQIQEEA VKFGRSSRIS CTCLYGGAPK GPQLRDLERG ADIVVATPGR LNDILEMRRI 300
  301 SLRQISYLVL DEADRMLDMG FEPQIRKIVK EIPTKRQTLM YTATWPKGVR KIAADLLVNP 360
  361 AQVNIGNVDE LVANKSITQH IEVVAPMEKQ RRLEQILRSQ EPGSKVIIFC STKRMCDQLT 420
  421 RNLTRQFGAA AIHGDKSQPE RDNVLNQFRS GRTPVLVATD VAARGLDVKD IRAVVNYDFP 480
  481 NGVEDYVHRI GRTGRAGATG QAFTFFGDQD SKHASDLIKI LEGANQRVPP QIREMATRGG 540
  541 GGMNKFSRWG PPSGGRGRGG DSGYGGRGSF ASRDSRSSNG WGRERERSRS PERFNRAPPP 600
  601 SSTGSPPRSF HETMMMKHR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] FFAS03 2.71 No description for 2yseA was found.
    2 View Details [99..542] PSI-BLAST 94.39794 No description for 2i4iA was found.
    3 View Details [543..619] PSI-BLAST 20.154902 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle