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Protein Overview: LSF2_ARATH

General Information:
Name(s) found: LSF2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|87116654|gb|ABD19691.1| At3g10940 [Arabidopsis thaliana] [NCBI NR]
  • gi|6016700|gb|AAF01527.1|AC009991_23 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18399058|ref|NP_566383.1| protein phosphatase-related [Arabidopsis thaliana] [NCBI NR]
  • gi|110740568|dbj|BAE98389.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana GN=LSF2 PE=1 SV=1 [Swiss-Prot]
  • (Q9SRK5) F9F8.24 protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|18399058|ref|NP_566383.1| protein phosphatase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protein phosphatase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protein phosphatase-related | chr3:3422264-3423399 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • phosphoprotein phosphatase/ protein tyrosine/serine/threonine phosphatase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g10940 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | dual specificity protein phosphatase (DsPTP1) family protein | chr3:3422259-3423394 REVERSE LENGTH=282 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana GN=LSF2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: protein amino acid dephosphorylation [IEA]
    dephosphorylation [IEA]
    Molecular Function: phosphatase activity [IEA]
    protein tyrosine/serine/threonine phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV  60
   61 SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL IVGSQPQKPE DIDHLKQEQN 120
  121 VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW 180
  181 AVSEGKGRVY VHCSAGLGRA PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT 240
  241 YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] PSI-BLAST 22.0 No description for 2i75A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle