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Protein Overview: ARFK_ARATH

General Information:
Name(s) found: ARFK_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 622 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    endomembrane system [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    regulation of transcription [IEA]
    response to hormone stimulus [IEA]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTSLEPLI ISIIKLQILQ LWLKLIAVGW NLGSNDDELY TELWKACAGP LVEVPRYGER  60
   61 VFYFPQGHME QLVASTNQGV VDQEIPVFNL PPKILCRVLS VTLKAEHETD EVYAQITLQP 120
  121 EEDQSEPTSL DPPLVEPAKP TVDSFVKILT ASDTSTHGGF SVLRKHATEC LPSLDMTQPT 180
  181 PTQELVARDL HGYEWRFKHI FRGQPRRHLL TTGWSTFVTS KRLVAGDAFV FLRGETGDLR 240
  241 VGVRRLAKQQ STMPASVISS QSMRLGVLAT ASHAVTTTTI FVVFYKPRIS QFIISVNKYM 300
  301 MAMKNGFSLG MRYRMRFEGE ESPERIFTGT IIGSGDLSSQ WPASKWRSLQ IQWDEPSSIQ 360
  361 RPNKVSPWEI EPFSPSALTP TPTQQQSKSK RSRPISEITG SPVASSFLSS FSQSHESNPS 420
  421 VKLLFQDPAT ERNSNKSVFS SGLQCKITEA PVTSSCRLFG FDLTSKPASA TIPHDKQLIS 480
  481 VDSNISDSTT KCQDPNSSNS PKEQKQQTST RSRIKVQMQG TAVGRAVDLT LLRSYDELIK 540
  541 ELEKMFEIEG ELSPKDKWAI VFTDDEGDRM LVGDDPWNEF CKMAKKLFIY PSDEVKKMRS 600
  601 KSLLGDKGTI VNLESDQRTV HV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] MSA 1.072984 View MSA. No confident structure predictions are available.
    2 View Details [119..260] PSI-BLAST 30.69897 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [261..384] MSA 1.133987 View MSA. No confident structure predictions are available.
    4 View Details [385..622] MSA 45.19099 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle