YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PTR40_ARATH

General Information:
Name(s) found: PTR40_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|7019635|emb|CAB75782.1| putative transporter protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231216|ref|NP_190155.1| proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47509 probable transporter protein - Arabidopsis thaliana [NCBI NR]
  • Putative protein NRT1/ PTR FAMILY 2.2 OS=Arabidopsis thaliana GN=NPF2.2 PE=5 SV=1 [Swiss-Prot]
  • (Q9M174) Putative transporter protein [athaliana3702.FASTAC.txt]
  • putative transporter protein [Arabidopsis thaliana]gi|11358694|pir||T47509 probable transporter protein - Arabidopsis thalianagi|15231216|ref|NP_190155.1| proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Proton-dependent oligopeptide transport (POT) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr3:16787253-16789135 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative transporter protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Major facilitator superfamily protein | chr3:16776268-16778150 FORWARD LENGTH=516 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative nitrate excretion transporter 4 OS=Arabidopsis thaliana GN=At3g45690 PE=5 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 516 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: oligopeptide transport [IEA][ISS]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSVDTEAM TTRDPSSKRG GWKTFPFMIA TLLGLSIASF GWVMNLVVFL IKEFNIKSIA  60
   61 ATQNSNIVNG CVSMLPVVAA ILADSFFGNI PVISVSAFIS LLGIILLTMI TSLDHLRPPP 120
  121 CETGSILCES PSKLQLGILY IALALVIIGS AGTRFTLASA GANQYEKPKE QGSFFNWYFL 180
  181 TLYTGAITGA TAIVYTQENA SWKLGFGLCA VANLISFIVF VSGKRYYKHD KPMGSPFTNL 240
  241 IRVVVAATRK RKAVISSREE DYHHGLGREG KTSSAMPSKS FRFFNRAALK TEDDSVNNNW 300
  301 RLCSVQEVED FKAVFRVLPL LLAIIFVSTP MVTQTSLIIL QALVTDRGLG PHFKIPAGSL 360
  361 QVIVIITACI VILMNNCLVY PMYQKLAHKP LTPLQKVGIG HVFIILSMAI SAIVEAKRLK 420
  421 TVTNGHSMSV LWLHRDFIAS VVIGISFYLS TALITLIQKT TKWLPNDINH GRVDNVYWLL 480
  481 VIVGVLNYFL VCAWFYRYRN LNDDDDQEQD PKDDTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..425] PSI-BLAST 4.522879 No description for 2gfpA was found.
    2 View Details [426..516] MSA 4.979997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle