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Protein Overview: gi|15220239, gi|...

General Information:
Name(s) found: gi|25403237 [NCBI NR]
gi|15220239 [NCBI NR]
gi|12322098 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • pir||D86480 probable RNA-binding protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15220239|ref|NP_174820.1| APUM17 (Arabidopsis Pumilio 17); RNA binding / binding [Arabidopsis thaliana] [NCBI NR]
  • gi|12322098|gb|AAG51092.1|AC027032_12 RNA-binding protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA][ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNINRLSMS TMFNALHEIL NEEPLAIPPP PSRGGYSYFH IRTTEMDLQR MFNFMTGSED  60
   61 LKDDISVLDT GMLKLMRMSD DMDVFFFVAI MRLFIHVMID KYASYVAIQG MRIFKQDKRE 120
  121 LMYDHILRYA LFLARDQYGC IALNEIIKEL DDPYYRDELM DIVSNNALLL SNDAYGNFVV 180
  181 QHVLKLHDSR CTGNIADKLC GYCVELSFKK YGSYIVERLL EVRDIPMATI VLDLLACKTE 240
  241 MLIRLARSEN GNFVVCKLLE LTNDILTADL FYSLVNKLRP YRFLLHRFPE SKIVAILGSM 300
  301 RVPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] PSI-BLAST 84.0 Pumilio 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle