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Protein Overview: gi|39545874, gi|...

General Information:
Name(s) found: gi|9759244 [NCBI NR]
gi|39545874 [NCBI NR]
gi|15237841 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9759244|dbj|BAB09768.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|39545874|gb|AAR28000.1| TFIIA-L3 [Arabidopsis thaliana] [NCBI NR]
  • gi|15237841|ref|NP_200731.1| transcription factor-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 186 amino acids

    Gene Ontology:
    Cellular Component: transcription factor TFIIA complex [IEA]
    Biological Process: transcription initiation from RNA polymerase II promoter [IEA]
    Molecular Function: RNA polymerase II transcription factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSTSDTSS SYNYVIDDVI NKSRCDLVYN GELDESVLSQ IQSMWKTKMI QAGAMSGTIE  60
   61 TSSASIPTTP VIVQTTLQTP DAIPLPEKKM SPKKESDGFY YIPQQDGARD EAIVDVDENE 120
  121 EPLNEDDDDE EDDIDDDDMN IQHLVMCQFD KVKRSKNKWE CKFNAGVMQI NGKNVLFSQA 180
  181 TGDFNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] FFAS03 4.06 Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
    2 View Details [84..186] PSI-BLAST 24.221849 Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle