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Protein Overview: RGAP4_ARATH

General Information:
Name(s) found: RGAP4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15229771|ref|NP_187756.1| rac GTPase activating protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12322911|gb|AAG51449.1|AC008153_22 putative rac GTPase activating protein; 62102-60058 [Arabidopsis thaliana] [NCBI NR]
  • Rho GTPase-activating protein 4 OS=Arabidopsis thaliana GN=ROPGAP4 PE=2 SV=1 [Swiss-Prot]
  • (Q9CAX8) Putative rac GTPase activating protein [athaliana3702.FASTAC.txt]
  • putative rac GTPase activating protein; 62102-60058 [Arabidopsis thaliana]gi|15229771|ref|NP_187756.1| rac GTPase activating protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Rac GTPase activating protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | rac GTPase activating protein, putative | chr3:3617529-3619573 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative rac GTPase activating protein; 62102-60058 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Rac GTPase activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | rac GTPase activating protein | chr3:3617523-3619567 REVERSE LENGTH=435 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative rac GTPase activating protein; 62102-60058 OS=Arabidopsis thaliana GN=F24K9.16 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intracellular [IEA]
    Biological Process: signal transduction [IEA]
    Molecular Function: Rac GTPase activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVLKSSQS CHFPSPSSSS STSCGGGNDG SNRDPHSPFN ISRREEEEEE EERSEKERER  60
   61 FELSSALEIL VSAIRRSVIG GCVGEEDLCS MEIGVPTDVR HVAHVTFDRF HGFLGLPVEF 120
  121 EPEVPRRAPS ASATVFGVST ESMQLSYDTR GNIVPTILLM MQSHLYSRGG LRVEGIFRIN 180
  181 GENGQEEYIR EELNKGIIPD NIDVHCLASL IKAWFRELPS GVLDSLSPEQ VMESESEDEC 240
  241 VELVRLLPST EASLLDWAIN LMADVVEMEQ LNKMNARNIA MVFAPNMTQM LDPLTALMYA 300
  301 VQVMNFLKTL IVKTLKDRKE SRDKLVPASN PSPRDHNGDQ SSSRQLLHLM KANKEETLDN 360
  361 FEAEMKDKEE SADEEEEECA ESVELVDIKK SSLVNNSSGG FGQKHIGWEE QRTMSKASSI 420
  421 VGRVNYRVEL FEAWR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] PSI-BLAST 54.30103 Crystal Structure of the Human Beta2-Chimaerin
    2 View Details [325..435] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • enzyme activator activity
    		•  0.53004209819211 bayes_pls_golite062009
  • GTPase activator activity
    		•  0.528693496432149 bayes_pls_golite062009
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
  • Ras GTPase activator activity
    		•  0.0454578418356197 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle