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Protein Overview: GAOX4_ARATH

General Information:
Name(s) found: GAOX4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|67633472|gb|AAY78660.1| putative gibberellin 20-oxidase [Arabidopsis thaliana] [NCBI NR]
  • pir||D96635 probable gibberellin 20-oxidase T7P1.12 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219842|ref|NP_176294.1| ATGA20OX4 (ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 4); gibberellin 20-oxidase [Arabidopsis thaliana] [NCBI NR]
  • gi|12323345|gb|AAG51653.1|AC018908_19 putative gibberellin 20-oxidase; 47658-49225 [Arabidopsis thaliana] [NCBI NR]
  • Gibberellin 20 oxidase 4 OS=Arabidopsis thaliana GN=GA20OX4 PE=2 SV=1 [Swiss-Prot]
  • (Q9C955) Putative gibberellin 20-oxidase [athaliana3702.FASTAC.txt]
  • putative gibberellin 20-oxidase; 47658-49225 [Arabidopsis thaliana]gi|15219842|ref|NP_176294.1| gibberellin 20-oxidase, putative [Arabidopsis thaliana]gi|25285683|pir||D96635 probable gibberellin 20-oxidase T7P1.12 [imported] - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Gibberellin 20-oxidase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATGA20OX4 | ATGA20OX4 (GIBBERELLIN 20-OXIDASE 4); gibberellin 20-oxidase | chr1:22456238-22457805 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative gibberellin 20-oxidase; 47658-49225 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative gibberellin 20-oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • gibberellin 20-oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATGA20OX4, GA20OX4 | gibberellin 20-oxidase 4 | chr1:22452573-22454140 FORWARD LENGTH=376 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Gibberellin 20-oxidase 4 OS=Arabidopsis thaliana GN=T7P1.12 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: gibberellin biosynthetic process [TAS]
    Molecular Function: gibberellin 20-oxidase activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI  60
   61 DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER LLSTAHKLMD TFFKSPNYEK 120
  121 LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY 180
  181 KDFGSVYQEY AETMSNLSLK IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL 240
  241 VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS 300
  301 CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM 360
  361 NTLEEFTNWL KNKGSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..376] PSI-BLAST 81.69897 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  2.13037944896112 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
    		•  1.96457406152694 bayes_pls_golite062009
  • binding
    		•  1.78258647804494 bayes_pls_golite062009
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.778311364997835 bayes_pls_golite062009
  • DNA binding
    		•  0.705906158188305 bayes_pls_golite062009
  • protein binding
    		•  0.200706152890822 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle