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Protein Overview: gi|8885581, gi|1...

General Information:
Name(s) found: gi|8885581 [NCBI NR]
gi|186532761 [NCBI NR]
Description(s) found:
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  • gi|8885581|dbj|BAA97511.1| MADS box transcription factor-like [Arabidopsis thaliana] [NCBI NR]
  • gi|186532761|ref|NP_001119499.1| MAF4 (MADS AFFECTING FLOWERING 4); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • (Q9LSR6) MADS box transcription factor-like [athaliana3702.FASTAC.txt]
  • MADS box transcription factor-like [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MADS box transcription factor-like [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AGL69, FCL4, MAF4 | MAF4 (MADS AFFECTING FLOWERING 4) | chr5:26009536-26013156 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: MAF4, FCL4, AGL69 | K-box region and MADS-box transcription factor family protein | chr5:25992310-25995930 FORWARD LENGTH=231 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • K-box region and MADS-box transcription factor family protein OS=Arabidopsis thaliana GN=MAF4 PE=3 SV=1 [ARATH-contam.fasta]
  • Isoform of F4KGH9, K-box region and MADS-box transcription factor family protein OS=Arabidopsis thaliana GN=MAF4 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of flower development [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRKVEIKR IENKSSRQVT FCKRRNGLME KARQLSILCE SSVALIIISA TGRLYSFSSG  60
   61 DSMAKILSRY ELEQADDLKT LCLNIVERDQ HRITLFFTVG IALESPRRGS KLDLEEKTLN 120
  121 YLSHKELLET IQCKIEEAKS DNVSIDCLKS LEEQLKTALS VTRARKTELM MELVKTHQEK 180
  181 EKLLREENQS LTNQLIKMGK MKKSVEAEDA RAMSPESSSD NKPPETLLLL K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] PSI-BLAST 20.522879 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [96..231] Pfam 4.154902 No description for PF01486.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle