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Protein Overview: EB1B_ARATH

General Information:
Name(s) found: EB1B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21536831|gb|AAM61163.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241860|ref|NP_201056.1| ATEB1B (END BINDING PROTEIN 1B); microtubule binding [Arabidopsis thaliana] [NCBI NR]
  • gi|10178081|dbj|BAB11500.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] [NCBI NR]
  • Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana GN=EB1B PE=1 SV=1 [Swiss-Prot]
  • (Q9FJJ5) Microtubule-associated protein EB1-like protein [athaliana3702.FASTAC.txt]
  • microtubule-associated protein EB1-like protein [Arabidopsis thaliana]gi|21536831|gb|AAM61163.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana]gi|15241860|ref|NP_201056.1| microtubule-associated EB1 family protein [Arabidopsis th [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Microtubule-associated EB1 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATEB1B | ATEB1B (Arabidopsis thaliana Microtubule End Binding Protein EB1A); microtubule binding | chr5:25110155-25112232 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATEB1B; microtubule binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • microtubule-associated protein EB1-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATEB1B, ATEB1, EB1B | end binding protein 1B | chr5:25092929-25095006 FORWARD LENGTH=293 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    microtubule organizing center [IDA]
    spindle [IDA]
    cortical microtubule, transverse to long axis [IDA]
    microtubule [IDA]
    phragmoplast [IDA]
    Biological Process: positive gravitropism [IMP]
    thigmotropism [IMP]
    Molecular Function: microtubule binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNIGMMDS AYFVGRNEIL SWINDRLHLN LSRIEEAASG AVQCQMLDMT FPGVVPMHKV  60
   61 NFEAKNEYEM IQNYKVMQEV FTKLKITKPL EVNRLVKGRP LDNLEFLQWL KRFCDSINGG 120
  121 IMNENYNPVE RRSRGGREKS VKGSSKISKS LQTNNMHHPP VATSNKPAGP KQAKSHGIGG 180
  181 GSNSSAEVQA LSKEVEDLKV SVDLLEKERD FYFSKLRDIE ILCQTPELDD LPIVVAVKKI 240
  241 LYATDANESV LEEAQECLNQ SLGLEGYEEE GKEEEEEEEE EEEEAAAAAE TQT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] PSI-BLAST 72.522879 Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3
    2 View Details [153..293] PSI-BLAST 25.39794 Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle