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Protein Overview: gi|60547937, gi|...

General Information:
Name(s) found: gi|60547937 [NCBI NR]
gi|52354537 [NCBI NR]
gi|15242219 [NCBI NR]
gi|10176950 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|60547937|gb|AAX23932.1| hypothetical protein At5g51920 [Arabidopsis thaliana] [NCBI NR]
  • gi|52354537|gb|AAU44589.1| hypothetical protein AT5G51920 [Arabidopsis thaliana] [NCBI NR]
  • gi|15242219|ref|NP_200005.1| catalytic/ pyridoxal phosphate binding [Arabidopsis thaliana] [NCBI NR]
  • gi|10176950|dbj|BAB10126.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 570 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: pyridoxal phosphate binding [IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQPFPGDSS PPNCLHGCFS SSPFHGTTSS EHPPHSTPTV TSATLRRNFA QTTVSTIFPD  60
   61 TEFTDPNSLP SHQESFSDFI QAYPNYSDTY KIDRLRSDHY FHLGLSHYTC LDYIGIGLYS 120
  121 YSQLLNYDPS TYQISSSLSE SPFFSVSPKI GNLKEKLLND GGQETEFEYS MKRRIMGFLK 180
  181 ISEEDYSMVF TANRTSAFRL VAESYPFNSK RKLLTVYDYE SEAVSEINRV SEKRGAKVAA 240
  241 AEFSWPRLKL CSSKLRKLVT AGKNGSKTKK KGIYVFPLHS RVTGSRYPYL WMSVAQENGW 300
  301 HVMIDACGLG PKDMDSFGLS IYNPDFMVCS FYKVFGENPS GFGCLFVKKS TISILESSTG 360
  361 PGMINLVPTD NPISLHALEI NRTQTDSEET YSFSSSVEYK GLDHVDSLGL VATGNRSRCL 420
  421 INWLVSALYK LKHSTTSRLV KIYGPKVNFN RGPAVAFNLF NHKGEKIEPF IVQKLAECSN 480
  481 ISLGKSFLKN ILFQEDYEGV KDRVFEKKRN RDVDEPRISV LTAALGFLAN FEDVYKLWIF 540
  541 VARFLDSEFV DKESVRCGVH VFEHKNREVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] PSI-BLAST 13.522879 No description for 2jg2A was found.
    2 View Details [108..570] PSI-BLAST 80.39794 Cysteine desulfurase IscS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.76873005093488 bayes_pls_golite062009
  • transferase activity
    		•  0.3093369052482 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle