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Protein Overview: AGP16_ARATH

General Information:
Name(s) found: AGP16_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75100629|sp|O82337.1|AGP16_ARATH RecName: Full=Arabinogalactan peptide 16; Short=AG-peptide 16; Flags: Precursor [NCBI NR]
  • gi|4559376|gb|AAD23036.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42569970|ref|NP_566070.3| AGP16 (ARABINOGALACTAN PROTEIN 16) [Arabidopsis thaliana] [NCBI NR]
  • pir||E84901 hypothetical protein At2g46330 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21553759|gb|AAM62852.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|20453295|gb|AAM19886.1| At2g46330/F11C10.2 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197373|gb|AAM15047.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15294170|gb|AAK95262.1|AF410276_1 At2g46330/F11C10.2 [Arabidopsis thaliana] [NCBI NR]
  • gi|10880509|gb|AAG24284.1|AF195897_1 arabinogalactan protein [Arabidopsis thaliana] [NCBI NR]
  • Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1 [Swiss-Prot]
  • (O82337) Hypothetical protein (Arabinogalactan protein) (At2g46330/F11C10.2) (Expressed protein) [athaliana3702.FASTAC.txt]
  • unknown [Arabidopsis thaliana]gi|20453295|gb|AAM19886.1| At2g46330/F11C10.2 [Arabidopsis thaliana]gi|4559376|gb|AAD23036.1| expressed protein [Arabidopsis thaliana]gi|20197373|gb|AAM15047.1| expressed protein [Arabidopsis thaliana]gi|15294170|gb|AAK95 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Arabinogalactan-protein (AGP16) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATAGP16, AGP16 | AGP16 (ARABINOGALACTAN PROTEIN 16) | chr2:19025803-19026181 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AGP16 (ARABINOGALACTAN PROTEIN 16) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • arabinogalactan protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g46330/F11C10.2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AGP16, ATAGP16 | arabinogalactan protein 16 | chr2:19018730-19019108 REVERSE LENGTH=73 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 73 amino acids

    Gene Ontology:
    Cellular Component: anchored to membrane [TAS]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRNSVTGF ALFSFVFAVI LSLAGAQSLA PAPAPTSDGT SIDQGIAYLL MVVALVLTYL  60
   61 IHPLDASSSY SFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] Pfam 30.677781 No description for PF06376.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle