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Protein Overview: PEN5_ARATH

General Information:
Name(s) found: PEN5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75262582|sp|Q9FJV8.1|PEN5_ARATH RecName: Full=Marneral synthase; Short=AtMRN1; AltName: Full=Pentacyclic triterpene synthase 5; Short=AtPEN5 [NCBI NR]
  • gi|56790234|gb|AAW30034.1| At5g42600 [Arabidopsis thaliana] [NCBI NR]
  • gi|56381897|gb|AAV85667.1| At5g42600 [Arabidopsis thaliana] [NCBI NR]
  • gi|15239009|ref|NP_199074.1| MRN1 (MARNERAL SYNTHASE); catalytic/ marneral synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|10177138|dbj|BAB10498.1| cycloartenol synthase [Arabidopsis thaliana] [NCBI NR]
  • Marneral synthase OS=Arabidopsis thaliana GN=MRN1 PE=1 SV=1 [Swiss-Prot]
  • (Q9FJV8) Cycloartenol synthase [athaliana3702.FASTAC.txt]
  • cycloartenol synthase [Arabidopsis thaliana]gi|15239009|ref|NP_199074.1| pentacyclic triterpene synthase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pentacyclic triterpene synthase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MRN | MRN (MARNERAL SYNTHASE); catalytic | chr5:17070794-17075203 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g42600 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • catalytic/ lyase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cycloartenol synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MRN1 | marneral synthase | chr5:17053566-17057975 FORWARD LENGTH=761 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 761 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: triterpenoid biosynthetic process [IDA]
    pentacyclic triterpenoid biosynthetic process [ISS]
    Molecular Function: marneral synthase activity [IDA]
    catalytic activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRLRIGAEA RQDPHLFTTN NFAGRQIWEF DANGGSPEEL AEVEEARLNF ANNKSRFKAS  60
   61 PDLFWRRQFL REKKFEQKIP RVRIEDAEKI TYEDAKTALR RGVLYYAACQ ANDGHWPSEV 120
  121 SGSMFLDAPF VICLYITGHL EKIFTLEHVK ELLRYMYNTQ NEDGGWGLDV ESHSVMFCTV 180
  181 LNYICLRILG VEPDHDGQKS ACARARKWIL DHGGATYAPM VAKAWLSVLG VYDWSGCKPL 240
  241 PPEIWMLPSF SPINGGTLWI YIRDLLMGMS YLYGKKFVAT PTALILQLRE ELYPQPYSKI 300
  301 IWSKARNRCA KEDLLYPKSF GQDLFWEGVH MLSENIINRW PLNKFVRQRA LRTTMELVHY 360
  361 HDETTHYITG ACVAKPFHML ACWVEDPDGD YFKKHLARVP DFIWIAEDGL KFQLMGMQSW 420
  421 NAALSLQVML AANMDDEIRS TLIKGYDFLK QSQISENPQG DHLKMFRDIT KGGWTFQDRE 480
  481 QGLPISDGTA ESIECCIHFH RMPSEFIGEK MDVEKLYDAV NFLIYLQSDN GGMPVWEPAP 540
  541 GKKWLEWLSP VEHVENTVVE QEYLECTGSV IAGLVCFKKE FPDHRPKEIE KLIKKGLKYI 600
  601 EDLQMPDGSW YGNWGVCFTY GTLFAVRGLA AAGKTFGNSE AIRRAVQFIL NTQNAEGGWG 660
  661 ESALSCPNKK YIPSKGNVTN VVNTGQAMMV LLIGGQMERD PSPVHRAAKV LINSQLDIGD 720
  721 FPQQERRGIY MNMLLHYPTY RNMFSLWALA LYTNALRLLV S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..761] PSI-BLAST 1000.0 Structure of human OSC in complex with Lanosterol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • lanosterol synthase activity
    		•  3.72954210081462 bayes_pls_golite062009
  • oxidosqualene cyclase activity
    		•  3.70516211286781 bayes_pls_golite062009
  • prenyltransferase activity
    		•  3.525366989371 bayes_pls_golite062009
  • isoprenoid binding
    		•  1.59014951619756 bayes_pls_golite062009
  • binding
    		•  0.663474225223042 bayes_pls_golite062009
  • protein prenyltransferase activity
    		•  0.55742738134604 bayes_pls_golite062009
  • catalytic activity
    		•  0.497699107100544 bayes_pls_golite062009
  • protein binding
    		•  0.172880799019885 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle