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Protein Overview: gi|15222747, gi|...

General Information:
Name(s) found: gi|4204257 [NCBI NR]
gi|25285552 [NCBI NR]
gi|22137174 [NCBI NR]
gi|15222747 [NCBI NR]
gi|13605853 [NCBI NR]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • gi|4204257|gb|AAD10638.1| putative pollen specific protein [Arabidopsis thaliana] [NCBI NR]
  • pir||D96598 hypothetical protein T5A14.1 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22137174|gb|AAM91432.1| At1g55570/T5A14_1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15222747|ref|NP_175953.1| sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] [NCBI NR]
  • gi|13605853|gb|AAK32912.1|AF367325_1 At1g55570/T5A14_1 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: copper ion binding [IEA]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN  60
   61 INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA GTMCPIPPGQ NFTYHFQPKD 120
  121 QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF 180
  181 LDSGRTIGRP DGILINGKSG KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM 240
  241 KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY 300
  301 EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN 360
  361 TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY DTISDNPNPD QIKNIKIEPN 420
  421 VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV 480
  481 QVYPKCWAAI LLTFDNCGMW NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC 540
  541 GLVKGKPKVN PYAGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..555] PSI-BLAST 92.522879 Ascorbate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  3.01218347550477 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.94535655802043 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.6745480751389 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.65536020269373 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.17429358667283 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.63942316748862 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.51790376716885 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.46068051535503 bayes_pls_golite062009
  • transporter activity
    		•  1.20799429432885 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.14867039407339 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.09624639459552 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.85648428256869 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.761084719356529 bayes_pls_golite062009
  • copper ion binding
    		•  0.73440414441333 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  0.575651787344859 bayes_pls_golite062009
  • ferroxidase activity
    		•  0.575651787344859 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions
    		•  0.17115124627182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle