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Protein Overview: PP431_ARATH

General Information:
Name(s) found: PP431_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 830 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: mRNA modification [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLPFNTIP NKVPFSVSSK PSSKHHDEQA HSPSSTSYFH RVSSLCKNGE IKEALSLVTE  60
   61 MDFRNLRIGP EIYGEILQGC VYERDLSTGK QIHARILKNG DFYARNEYIE TKLVIFYAKC 120
  121 DALEIAEVLF SKLRVRNVFS WAAIIGVKCR IGLCEGALMG FVEMLENEIF PDNFVVPNVC 180
  181 KACGALKWSR FGRGVHGYVV KSGLEDCVFV ASSLADMYGK CGVLDDASKV FDEIPDRNAV 240
  241 AWNALMVGYV QNGKNEEAIR LFSDMRKQGV EPTRVTVSTC LSASANMGGV EEGKQSHAIA 300
  301 IVNGMELDNI LGTSLLNFYC KVGLIEYAEM VFDRMFEKDV VTWNLIISGY VQQGLVEDAI 360
  361 YMCQLMRLEK LKYDCVTLAT LMSAAARTEN LKLGKEVQCY CIRHSFESDI VLASTVMDMY 420
  421 AKCGSIVDAK KVFDSTVEKD LILWNTLLAA YAESGLSGEA LRLFYGMQLE GVPPNVITWN 480
  481 LIILSLLRNG QVDEAKDMFL QMQSSGIIPN LISWTTMMNG MVQNGCSEEA ILFLRKMQES 540
  541 GLRPNAFSIT VALSACAHLA SLHIGRTIHG YIIRNLQHSS LVSIETSLVD MYAKCGDINK 600
  601 AEKVFGSKLY SELPLSNAMI SAYALYGNLK EAIALYRSLE GVGLKPDNIT ITNVLSACNH 660
  661 AGDINQAIEI FTDIVSKRSM KPCLEHYGLM VDLLASAGET EKALRLIEEM PFKPDARMIQ 720
  721 SLVASCNKQR KTELVDYLSR KLLESEPENS GNYVTISNAY AVEGSWDEVV KMREMMKAKG 780
  781 LKKKPGCSWI QITGEEGVHV FVANDKTHTR INEIQMMLAL LLYDMGTGSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..490] PSI-BLAST 7.30103 Clathrin D6 Coat
    2 View Details [491..830] PSI-BLAST 37.39794 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle