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Protein Overview: FOX4_ARATH

General Information:
Name(s) found: FOX4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9797757|gb|AAF98575.1|AC013427_18 Contains weak similarity to berberine bridge enzyme (bbe1) from Berberis stolonifera gb|AF049347 and contains a FAD binding PF|01565 domain. EST gb|W43206 comes from this gene. [Arabidopsis thaliana] [NCBI NR]
  • pir||H86390 T1K7.21 protein - Arabidopsis thaliana [NCBI NR]
  • gi|15222704|ref|NP_173965.1| FAD-binding domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 [Swiss-Prot]
  • (Q9FZC7) T1K7.21 protein [athaliana3702.FASTAC.txt]
  • T1K7.21 protein - Arabidopsis thalianagi|15222704|ref|NP_173965.1| FAD-binding domain-containing protein [Arabidopsis thaliana]gi|9797757|gb|AAF98575.1| Contains weak similarity to berberine bridge enzyme (bbe1) from Berberis stolonifera gb|AF049347 and [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 FAD-binding domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | FAD-binding domain-containing protein | chr1:9138761-9140419 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • electron carrier [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Contains weak similarity to berberine bridge enzyme (bbe1) from Berberis stolonifera gb|AF049347 and contains a FAD binding PF|01565 domain. EST gb|W43206 comes from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FAD-binding Berberine family protein | chr1:9138774-9140432 REVERSE LENGTH=552 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • FAD-binding and BBE domain-containing protein OS=Arabidopsis thaliana GN=T1K7.21 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 552 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: FAD binding [IEA]
    catalytic activity [IEA]
    oxidoreductase activity [IEA]
    electron carrier activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEAFVFLLC LTNKFPKKFN SCSKKKETLY VLGLVLLVSF IEAPVTKPNF GKFIECLRDR  60
   61 TTPENPITDV ISIADNSTTF LSSYVSYTKN KRFSSPNFKK LLAIIAAKHV SHVQATVVCA 120
  121 KSNGIQLRIR SGGHDNEGFS YMSSVPFVIL DMHNLRSIDV NLSRKNAWVQ AGATLGELYV 180
  181 KINEASQTLA FPAGVCPTVG AGGHISGGGF GNLMRKFGIT VDHVIDAQII DVNGKLLNRA 240
  241 AMGEDLFWAI RGGGSSFGVI LSWKINLVEV PKILTVFKVN KTLEQGGTDI LYKWQLVANK 300
  301 LPDSLFITAW PRTVNGPKPG ERTVAVVFYA QFLGPTDKLM EIMDQSFPEL GLGREDCHEM 360
  361 SWLNTTLFWA NYPAGTPKSI LLDRPPTNSV SFKSKSDFVK KPIPKKGLEK LWKTMFKFNS 420
  421 SVSLQFNPYG GVMDRIPATA TAFPHRKGNL FKVQYSTMWF DANATESSLA MMNELFEVAE 480
  481 PYVSSNPREA FFNFRDIDIG SNPSGETNVD EAKIYGSKYF LGNLKRLMDV KAKYDPDNFF 540
  541 KNEQSIPPVR VK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..552] PSI-BLAST 54.69897 Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.42

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle