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Protein Overview: gi|15241478, gi|...

General Information:
Name(s) found: gi|15241478 [NCBI NR]
gi|10176894 [NCBI NR]
Description(s) found:
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  • gi|15241478|ref|NP_199252.1| FAD-binding domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10176894|dbj|BAB10124.1| berberine bridge enzyme-like protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FKU9) Berberine bridge enzyme-like protein [athaliana3702.FASTAC.txt]
  • berberine bridge enzyme-like protein [Arabidopsis thaliana]gi|15241478|ref|NP_199252.1| FAD-binding domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 FAD-binding domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | FAD-binding domain-containing protein | chr5:17899556-17902133 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • berberine bridge enzyme-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • electron carrier [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FAD-binding Berberine family protein | chr5:17882329-17884906 REVERSE LENGTH=542 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Berberine bridge enzyme-like protein OS=Arabidopsis thaliana GN=At5g44390 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 542 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: oxidoreductase activity [IEA]
    catalytic activity [IEA]
    FAD binding [IEA]
    electron carrier activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSKPLPTI SCISVFALYF SFYTITLTSS TSLQDDFIKC LYRNTNVRFT LDKTFFTPER  60
   61 NASIFTEVLE STAQNQRYLT KTMPKPGFIF KPVHESHVQA SVICSKKLEI HFRVRSGGHD 120
  121 YEGVSYVSQI EKPFVLIDLS KLRQINVDIK DTSAWVEAGA TVGELYYRIA EKSKFHGFPA 180
  181 GVYPSLGIGG HITGGAYGSL MRKYGLAADN VLDAKIVDAN GKLLDRASMG EDLFWAIRGG 240
  241 SGGSFGIILS WKIKLVPVPE TLTVFTVTKT FEQDRSFKIL SKWQEIADNL VDELFLRVFF 300
  301 TVSGNKANKT VTMAYIGQFL GEKGTLMEVM KKDFPELGLT QKDCIEMSWI DSIIYNSGFP 360
  361 TNPPPPIEIL LQAKSPIGKV YFKGKSDFAK KPIPVLGLEG MFKKLLEEDA ALVIWTPYGG 420
  421 KMDKIPESEI PFPHRNGTNF MIQYYRSWSD SEKRPNRRTK WIRELYGYMT PYVSSNPRQA 480
  481 YVNYRDLDLG QNKDNSKSNF IEAKIWGANY FKDNFNRLVR IKSKVDPDNF FRHEQSIPTL 540
  541 PV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..542] PSI-BLAST 57.0 Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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