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Protein Overview: ORP3B_ARATH

General Information:
Name(s) found: ORP3B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6478922|gb|AAF14027.1|AC011436_11 putative oxysterol-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20260050|gb|AAM13372.1| putative oxysterol-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17065254|gb|AAL32781.1| putative oxysterol-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232633|ref|NP_187541.1| ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding [Arabidopsis thaliana] [NCBI NR]
  • Oxysterol-binding protein-related protein 3B OS=Arabidopsis thaliana GN=ORP3B PE=2 SV=1 [Swiss-Prot]
  • (Q9SR33) Putative oxysterol-binding protein [athaliana3702.FASTAC.txt]
  • putative oxysterol-binding protein [Arabidopsis thaliana]gi|20260050|gb|AAM13372.1| putative oxysterol-binding protein [Arabidopsis thaliana]gi|17065254|gb|AAL32781.1| putative oxysterol-binding protein [Arabidopsis thaliana]gi|15232633|ref|NP_187541.1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oxysterol-binding family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxysterol-binding family protein | chr3:2858074-2860468 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative oxysterol-binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxysterol binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ORP3B | OSBP(oxysterol binding protein)-related protein 3B | chr3:2858068-2860462 FORWARD LENGTH=458 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: steroid metabolic process [IEA][ISS]
    Molecular Function: oxysterol binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE  60
   61 ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM TMLQKMAELM EYSHLLDMAD 120
  121 KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS 180
  181 AGHAENEHFT YDCTSKLKTK FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG 240
  241 RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES 300
  301 MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR 360
  361 PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT PKWFDVTEEV TATPWGDLEV 420
  421 YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..458] PSI-BLAST 73.30103 Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • sterol binding
    		•  3.12877992228795 bayes_pls_golite062009
  • oxysterol binding
    		•  2.56824234952236 bayes_pls_golite062009
  • steroid binding
    		•  2.54679035876403 bayes_pls_golite062009
  • lipid binding
    		•  1.46539100663772 bayes_pls_golite062009
  • binding
    		•  0.958372296392311 bayes_pls_golite062009
    		• 0.35288515581255 bayes_pls_golite062009
  • phospholipid binding
    		•  0.0867097353003303 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle