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Protein Overview: gi|79312699, gi|...

General Information:
Name(s) found: gi|79312699 [NCBI NR]
gi|6728991 [NCBI NR]
gi|222424114 [NCBI NR]
gi|15228442 [NCBI NR]
Description(s) found:
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  • gi|79312699|ref|NP_001030627.1| aminoacyl-tRNA hydrolase [Arabidopsis thaliana] [NCBI NR]
  • gi|6728991|gb|AAF26989.1|AC018363_34 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|222424114|dbj|BAH20016.1| AT3G03010 [Arabidopsis thaliana] [NCBI NR]
  • gi|15228442|ref|NP_186951.1| aminoacyl-tRNA hydrolase [Arabidopsis thaliana] [NCBI NR]
  • (Q9M8U2) F13E7.4 protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|15228442|ref|NP_186951.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83813.1); similar to Os04g0652900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054102.1); contains InterPro d [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83813.1); similar to Os04g0652900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054102.1); contains InterPro domain Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833) | chr3:678989-680144 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Peptidyl-tRNA hydrolase II (PTH2) family protein | chr3:678982-680137 REVERSE LENGTH=179 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT3G03010 protein OS=Arabidopsis thaliana GN=F13E7.4 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 179 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: translation [IEA]
    Molecular Function: aminoacyl-tRNA hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVWLLSVL LVGAALGYYI STLRQTRRIF LSSKSVAIDA GSSGNKKTKS KEPLEIEKLA  60
   61 DFRKNFKMVL VVRNDLKMGK GKIAAQCSHA TLGLYKKLLQ RAPKALNRWE YCAQPKVVVK 120
  121 IESEEEMLVL QERAKTLKLP THITIDAGKT QIAPNSRTVM AILGPVDNVD EVTGGLKLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 46.154902 Crystal structure of bit1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.00445818053203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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