YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LRK42_ARATH

General Information:
Name(s) found: LRK42_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|7630001|emb|CAB88343.1| serine/threonine-specific kinase like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232332|ref|NP_190949.1| lectin protein kinase, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T45921 serine/threonine-specific kinase like protein - Arabidopsis thaliana [NCBI NR]
  • L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1 [Swiss-Prot]
  • (Q9M345) Serine/threonine-specific kinase like protein [athaliana3702.FASTAC.txt]
  • serine/threonine-specific kinase like protein [Arabidopsis thaliana]gi|11346396|pir||T45921 serine/threonine-specific kinase like protein - Arabidopsis thalianagi|15232332|ref|NP_190949.1| lectin protein kinase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Lectin protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | lectin protein kinase, putative | chr3:19944131-19946164 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • serine/threonine-specific kinase like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Concanavalin A-like lectin protein kinase family protein | chr3:19933153-19935186 REVERSE LENGTH=677 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 677 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: protein amino acid phosphorylation [IEA]
    Molecular Function: kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV  60
   61 QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL SGHGIAFVVA PTLGLPFALP 120
  121 SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD 180
  181 HDKFQNLSLI SRKRIQVWID YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY 240
  241 VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS 300
  301 LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR 360
  361 VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS HRNLVPLLGY CRRRGELLLV 420
  421 YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL 480
  481 DADFNGRLGD FGLARLYDHG SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE 540
  541 VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL 600
  601 CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK 660
  661 GFTGGSSIAD SLLSGGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 38.045757 Legume lectin
    2 View Details [265..677] PSI-BLAST 69.045757 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.49960529341364 bayes_pls_golite062009
  • protein kinase activity
    		•  1.07028239338078 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.98109258475825 bayes_pls_golite062009
  • kinase activity
    		•  0.940507392052419 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.866225866991391 bayes_pls_golite062009
  • transferase activity
    		•  0.634621009477606 bayes_pls_golite062009
  • protein binding
    		•  0.501917973797597 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle