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Protein Overview: FCL2_ARATH

General Information:
Name(s) found: FCL2_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: GDP-L-fucose biosynthetic process [ISS]
    metabolic process [IEA]
    cellular metabolic process [IEA]
    Molecular Function: coenzyme binding [IEA]
    catalytic activity [IEA][ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNTGSEMK SGSFMLEKSA KIFVAGHRGL VGSAIVRKLQ DQGFTNLVLR THSELDLTSQ  60
   61 SDVESFFATE KPVYVILAAA KVGGIHANNT YPADFIGVNL QIQTNVIHSA YTHGVKKLLF 120
  121 LGSSCIYPKF APQPIPESAL LTGPLEPTNE WYAIAKIAGI KMCQAYRLQH QWDAISGMPT 180
  181 NLYGQNDNFH PENSHVLPAL MRRFHEAKAN NADEVVVWGS GSPLREFLHV DDLADACVFL 240
  241 MDQYSGFEHV NVGSGVEVTI KELAELVKEV VGFKGKLVWD TTKPDGTPRK LMDSSKLASL 300
  301 GWTPKISLKD GLSQTYEWYL ENVVQKKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 64.0 GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • UDP-glucose 4-epimerase activity
    		•  2.13934644118967 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.03956654822048 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.82673050487418 bayes_pls_golite062009
  • protein binding
    		•  0.381642189238843 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle