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Protein Overview: gi|15239215, gi|...

General Information:
Name(s) found: gi|15239215 [NCBI NR]
gi|10177113 [NCBI NR]
Description(s) found:
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  • gi|15239215|ref|NP_201399.1| auxin efflux carrier family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177113|dbj|BAB10403.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9FKY4) Gb|AAD32907.1 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15239215|ref|NP_201399.1| auxin efflux carrier family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Auxin efflux carrier family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | auxin efflux carrier family protein | chr5:26409670-26411458 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • auxin:hydrogen symporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Auxin efflux carrier family protein | chr5:26392444-26394232 FORWARD LENGTH=395 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Auxin efflux carrier family protein OS=Arabidopsis thaliana GN=At5g65980 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    endomembrane system [IEA]
    Biological Process: auxin polar transport [ISS]
    Molecular Function: auxin:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL  60
   61 AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK PQLHGLIIAT CASGNMGNLM 120
  121 LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA 180
  181 AGLVKSPNKD IDSDPHALLL KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG 240
  241 AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK 300
  301 KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL 360
  361 FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] MSA 11.396996 View MSA. No confident structure predictions are available.
    2 View Details [203..395] MSA 22.418996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle