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Protein Overview: CLC1_ARATH

General Information:
Name(s) found: CLC1_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Clathrin light chain 1 OS=Arabidopsis thaliana GN=At2g20760 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    Molecular Function: protein binding [IEA]
    structural molecule activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA  60
   61 SSPNHDFSSP FESSVNDANG NGGGSGGDAI FASDGPILPD PNEMREEGFQ RREWRRLNTI 120
  121 HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV 180
  181 DKHYWKAIAE LIPREVPNIE KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT 240
  241 NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK 300
  301 RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] deduced N/A No confident structure predictions are available.
    2 View Details [74..171] PSI-BLAST 24.522879 Clathrin D6 Coat
    3 View Details [172..338] PSI-BLAST 17.522879 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle