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Protein Overview: gi|15235381, gi|...

General Information:
Name(s) found: gi|7488358 [NCBI NR]
gi|7267948 [NCBI NR]
gi|4725945 [NCBI NR]
gi|15235381 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • pir||T07638 SWH1 protein homolog T1P17.50 - Arabidopsis thaliana [NCBI NR]
  • gi|7267948|emb|CAB78289.1| putative SWH1 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4725945|emb|CAB41716.1| putative SWH1 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15235381|ref|NP_192983.1| oxysterol binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 694 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: steroid metabolic process [IEA][ISS]
    Molecular Function: oxysterol binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR  60
   61 RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH KNIGIVHLKQ VSSYRESKSD 120
  121 HRKFYIFTAT KTLHLRTDSR SDRAAWLQAL ASTRGIVPLQ SINGDFSFVS PKDLSISTER 180
  181 LKKRLFEEGM NESLVKECEQ IVDSEFCEVQ EQIKLLHEER KKLLDALRQL EMANLEAEAS 240
  241 GIHDDVYQLR NHKYSSLGRG KYSECSTSAS SDDKQEFEDI SEEDEASFHD TKESFGEPDV 300
  301 GSVLTHFKRR TKLPDPAEKE RGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL 360
  361 EYSYLLDQAY EYGKSGKSLL RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG 420
  421 IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQLEPVGILT LEFDDGEIFQ 480
  481 WSKVTTTIYN ILLGKLYCDH HGIMKIRGNR QYSCMLKFKE QSILDRNPHQ VNGFVEDVTG 540
  541 KKAATVFGKW NDSLYYVAGD GINKASASLL WKATKAPPNV TRYNFTSFAM TLNELIPGLE 600
  601 EKLPPTDSRL RPDQRHLENG EYEKANEEKQ RLERRQRMSR QIQESGWRPR WFEPQGESES 660
  661 YKYTGGYWEA RDVKSWDDCP NIFGEFTEEV ADCA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] PSI-BLAST 15.30103 Grp1
    2 View Details [242..314] deduced N/A No confident structure predictions are available.
    3 View Details [315..694] PSI-BLAST 65.0 Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle