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Protein Overview: GGPP3_ARATH

General Information:
Name(s) found: GGPP3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthetase 3, chloroplastic; Short=GGPP synthetase 3; Short=GGPS3; Includes: RecName: Full=Dimethylallyltranstransferase; Includes: RecName: Full=Geranyltranstransferase; Inclu [NCBI NR]
  • gi|15231881|ref|NP_188073.1| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3); farnesyltranstransferase [Arabidopsis thaliana] [NCBI NR]
  • Geranylgeranyl pyrophosphate synthase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=1 SV=1 [Swiss-Prot]
  • (Q9LUD9) Geranylgeranyl pyrophosphate synthase [athaliana3702.FASTAC.txt]
  • geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]gi|15231881|ref|NP_188073.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Geranylgeranyl pyrophosphate synthase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Geranylgeranyl pyrophosphate synthetase 3, chloroplast precursor (GGPP synthetase 3) (GGPS3) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ; Farnesyltranstransferase ] [nr-271106-contam.fasta]
  • GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3); farnesyltranstransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Geranylgeranyl pyrophosphate synthase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 360 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    etioplast [IDA]
    Biological Process: isoprenoid biosynthetic process [ISS][TAS]
    Molecular Function: farnesyltranstransferase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTVHLSSF SLFIQSRGRR DNSISSVKSL KKRTGLSPSS ALTSQGGRDM IPPEGKCNDH  60
   61 NSAFDFKLYM IRKAESVNAA LDVSVPLREP LTVQEAVRYS LLAGGKRVRP LLCIAVCELV 120
  121 GGDEATAMSA ACAVEMIHTS SLIHDDLPCM DNADLRRGKP TNHKVYGEDM AVLAGDALLA 180
  181 LAFEHMTVVS SGLVAPERMI RAVVELARAI GTTGLVAGQM IDLASERLNP DKVGLEHLEF 240
  241 IHLHKTAALL EAAAVLGVIM GGGTEEEIEK LRKYARCIGL LFQVVDDILD VTKSTEELGK 300
  301 TAGKDVMAGK LTYPRLIGLE RSKEVAEKLR REAEEQLLGF DPSKAAPLVA LASYIACRHN 360
  361

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..360] PSI-BLAST 81.045757 No description for 2j1pA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle