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Protein Overview: GH35_ARATH

General Information:
Name(s) found: GH35_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana GN=GH3.5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: auxin homeostasis [TAS]
    response to auxin stimulus [IMP][ISS]
    Molecular Function: indole-3-acetic acid amido synthetase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEAPKKESL EVFDLTLDQK NKQKLQLIEE LTSNADQVQR QVLEEILTRN ADVEYLRRHD  60
   61 LNGRTDRETF KNIMPVITYE DIEPEINRIA NGDKSPILSS KPISEFLTSS GTSGGERKLM 120
  121 PTIEEELDRR SLLYSLLMPV MSQFVPGLEN GKGMYFLFIK SESKTPGGLP ARPVLTSYYK 180
  181 SSHFKERPYD PYTNYTSPNE TILCSDSYQS MYSQMLCGLC QHQEVLRVGA VFASGFIRAI 240
  241 KFLEKHWIEL VRDIRTGTLS SLITDPSVRE AVAKILKPSP KLADFVEFEC KKSSWQGIIT 300
  301 RLWPNTKYVD VIVTGTMSQY IPTLDYYSNG LPLVCTMYAS SECYFGVNLR PLCKPSEVSY 360
  361 TLIPSMAYFE FLPVHRNNGV TNSINLPKAL TEKEQQELVD LVDVKLGQEY ELVVTTYAGL 420
  421 CRYRVGDLLR VTGFKNKAPQ FSFICRKNVV LSIDSDKTDE VELQNAVKNA VTHLVPFDAS 480
  481 LSEYTSYADT SSIPGHYVLF WELCLDGNTP IPPSVFEDCC LAVEESFNTV YRQGRVSDKS 540
  541 IGPLEIKIVE PGTFDKLMDY AISLGASINQ YKTPRCVKFA PIIELLNSRV VDSYFSPKCP 600
  601 KWVPGHKQWG SN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] MSA 2.069975 View MSA. No confident structure predictions are available.
    2 View Details [147..313] deduced N/A No confident structure predictions are available.
    3 View Details [314..508] MSA 1.075945 View MSA. No confident structure predictions are available.
    4 View Details [509..612] MSA 1.067986 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle