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Protein Overview: gi|15222523, gi|...

General Information:
Name(s) found: gi|15222523 [NCBI NR]
gi|12321308 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|15222523|ref|NP_174477.1| terpene synthase/cyclase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12321308|gb|AAG50729.1|AC079041_22 terpene synthase family protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 606 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: metabolic process [IEA]
    Molecular Function: magnesium ion binding [IEA]
    lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAIRIGFGL PNVHSVPLCL TTTRCLFPRQ RLLHSHTPSW KPAKQQDFFV ASSSKKSSDD  60
   61 LESSLPTPHF SPSLWGDHFL SVSLNRAVEF DELEREIETT KPLARDKLMS SESSDKEKIR 120
  121 LIHLLVSMGI SYHFDKEIQD ILKHSFTKLD DIIVGEDDLE TISIMFEVFK LYGHKMSCDA 180
  181 FDRFRGNDGR FKESLVRDFR GMLQLFEVAH LGTPCEVIMD EALSFTRNHL ESLTSGNAST 240
  241 ASPHLLKHIQ NSLYIPRYCN IEVLVAREYI SYYEQEEGHD EILLKFAKLN FNFCQFHYVQ 300
  301 ELKTLTKWWR DLDLASKLPY IRDRLVESHL VALGPYFEPH YSLGRIIVAK INMIMVVVDD 360
  361 TYDAYATLPQ VKALTECLQS IEVSDKLPDY LRIVLGSLFD VMGEIEREMR PLGRLYRVKQ 420
  421 VVEKIKIITK AYQEIAKWAR TGHVSTFDEY MKVGVLTAGM ADYAAYCFIG MEDINEKEAF 480
  481 EWLNSNPLII KHLTAMFRLA NDVGTYETEI NRGEVANGLN CYMKQYGVTK EEASRELRKM 540
  541 YVYRKKVVVE EFMNSHDHVP RQVLLRCLNI ARIFDVFYTE GDGYSEPKGK IEHFMTSLYL 600
  601 HPIPLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..606] PSI-BLAST 1000.0 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.87397377711135 bayes_pls_golite062009
  • transferase activity
    		•  1.34929557841705 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.22586398285056 bayes_pls_golite062009
  • prenyltransferase activity
    		•  0.302854173865421 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle