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Protein Overview: SMC22_ARATH

General Information:
Name(s) found: SMC22_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis thaliana GN=SMC2-2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1171 amino acids

    Gene Ontology:
    Cellular Component: chromosome [IEA]
    Biological Process: chromosome organization [IEA]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIKEICLEG FKSYATRTVV PGFDPHFNAI TGLNGSGKSN ILDSICFVLG ITNLQQVRAA  60
   61 NLQELVYKQG QAGITRATVS VTFDNSERNR SPLGHEDHSE ITVTRQIVVG GKNKYLINGK 120
  121 LAQPNQVQNL FHSVQLNVNN PHFLIMQGRI TKVLNMKPME ILSMLEEAAG TRMYENKKEA 180
  181 ALKTLEKKQT KVDEINKLLE KDILPALEKL RREKSQYMQW ANGNAELDRL KRFCVAFEYV 240
  241 QAEKIRDNSI HVVEEMKIKM TGIDEQTDKT QGEISELEKQ IKALTQAREA SMGGEVKALS 300
  301 DKVDSLSNEV TRELSKLTNM EDTLQGEEKN AEKMVHNIED LKKSVEERAS ALNKCDEGAA 360
  361 ELKQKFQEFS TTLEECEREH QGILAGKSSG DEEKCLEDQL RDAKISVGTA ETELKQLNTK 420
  421 ISHCEKELKE KKSQLMSKQD EAVAVENELD ARKNDVESVK RAFDSLPYKE GQMEALEKDR 480
  481 ESELEIGHRL KDKVHELSAQ LANVQFTYRD PVKNFDRSKV KGVVAKLIKV NDRSSMTALE 540
  541 VTAGGKLFNV IVDTEDTGKQ LLQKGDLRRR VTIIPLNKIQ SHLVPPRVQQ ATVGKGNAEL 600
  601 ALSLVGYSEE LKNAMEYVFG STFVCKTTDA AKEVAFNREI RTPSVTLEGD VFQPSGLLTG 660
  661 GSRKGGGDLL RQLHDLAEAE TKFRAHQKSL SEIEANIKEL QPLQTKFTDM KAQLELKMYD 720
  721 MSLFLKRAEQ NEHHKLGDAV KKLEEEVEEM RSQIKEKEGL YKSCADTVST LEKSIKDHDK 780
  781 NREGRLKDLE KNIKTLKARI QASSKDLKGH ENVRERLVME QEAVTQEQSY LKSQLTSLRT 840
  841 QISTLASDVG NQRAKVDAIQ KDHDQSLSEL KLIHAKMKEC DTQISGSIAE QEKCLQKISD 900
  901 MKLDRKKLEN EVTRMEMEHK NCSVKVDKLV EKHTWITSEK RLFGNGGTDY DFESRDPHKA 960
  961 REELERLQTD QSSLEKRVNK KVTAMFEKAE DEYNALMTKK NIIETDKSKI KKVIEELDEK1020
 1021 KKETLKVTWV KVNQDFGSIF STLLPGTMSK LEPPEGGTFL DGLEVRVAFG DVWKQSLSEL1080
 1081 SGGQRSLLAL SLILALLLFK PAPIYILDEV DAALDLSHTQ NIGRMIKSHF PHSQFIVVSL1140
 1141 KEGMFSNADV LFRTKFVDGV STVQRTVTKQ S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 50.39794 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.
    2 View Details [180..463] deduced N/A No confident structure predictions are available.
    3 View Details [464..552] PSI-BLAST 12.0 Smc hinge domain
    4 View Details [553..1020] PSI-BLAST 4.154902 COLICIN IA
    5 View Details [1021..1171] PSI-BLAST 24.30103 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle