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Protein Overview: PP233_ARATH

General Information:
Name(s) found: PP233_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: cytosolic ribosome [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGKNKIEIL FQLQSALSRR RISSLVDFRR VFPPETPNHK NNITLSRFHF LGTHFLHSLG  60
   61 APDKFPNRFN DDKDKQSALD VHNIIKHHRG SSPEKIKRIL DKCGIDLTEE LVLEVVNRNR 120
  121 SDWKPAYILS QLVVKQSVHL SSSMLYNEIL DVLGKMRRFE EFHQVFDEMS KRDGFVNEKT 180
  181 YEVLLNRYAA AHKVDEAVGV FERRKEFGID DDLVAFHGLL MWLCRYKHVE FAETLFCSRR 240
  241 REFGCDIKAM NMILNGWCVL GNVHEAKRFW KDIIASKCRP DVVSYGTMIN ALTKKGKLGK 300
  301 AMELYRAMWD TRRNPDVKIC NNVIDALCFK KRIPEALEVF REISEKGPDP NVVTYNSLLK 360
  361 HLCKIRRTEK VWELVEEMEL KGGSCSPNDV TFSYLLKYSQ RSKDVDIVLE RMAKNKCEMT 420
  421 SDLYNLMFRL YVQWDKEEKV REIWSEMERS GLGPDQRTYT IRIHGLHTKG KIGEALSYFQ 480
  481 EMMSKGMVPE PRTEMLLNQN KTKPRVEDKM LRSNLTSEES ESD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..415] PSI-BLAST 16.154902 No description for 2gw1A was found.
    2 View Details [416..523] PSI-BLAST 37.0 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle