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Protein Overview: RGAP1_ARATH

General Information:
Name(s) found: RGAP1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Rho GTPase-activating protein 1 OS=Arabidopsis thaliana GN=ROPGAP1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intracellular [IEA]
    Biological Process: signal transduction [IEA]
    Molecular Function: Rac GTPase activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVLHFPSS PSASHSSSSS SSSPSPSSLS YASRSNATLL ISSDHNRRNP VARFDQDVDF  60
   61 HASIEEQDLR RRSSTDGGEE DDGGEDQISL LALLVAIFRR SLISCKSNRR ELCSMEIGWP 120
  121 TNVRHVAHVT FDRFNGFLGL PVEFEPEVPR RAPSASATVF GVSTESMQLS YDSRGNCVPT 180
  181 ILLLMQNCLY SQGGLQAEGI FRLTAENSEE EAVREQLNRG FIPERIDVHC LAGLIKAWFR 240
  241 ELPTSVLDSL SPEQVMQCQT EEENVELVRL LPPTEAALLD WAINLMADVV QYEHLNKMNS 300
  301 RNIAMVFAPN MTQMDDPLTA LMYAVQVMNF LKTLIEKTLR ERQDSVVEQA HAFPLEPSDE 360
  361 SGHQSPSQSL AFNTSEQSEE TQSDNIENAE NQSSSSEISD ELTLENNACE QRETDFGKYR 420
  421 TGRLSDSSQQ VVLNLDPPAQ WPVGRTKGLT NLSRVGSRVE RTEAWR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] PSI-BLAST 7.0 No description for 2j59M was found.
    2 View Details [71..347] PSI-BLAST 51.522879 Crystal Structure of the Human Beta2-Chimaerin
    3 View Details [348..466] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • enzyme activator activity
    		•  0.53004209819211 bayes_pls_golite062009
  • GTPase activator activity
    		•  0.528693496432149 bayes_pls_golite062009
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
  • Ras GTPase activator activity
    		•  0.0454578418356197 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle