Protein Overview: gi|125847205, gi...

General Information:
Name(s) found:	gi\|220673404 [NCBI NR] gi\|125847205 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|220673404\|emb\|CAX13362.1\| novel protein similar to vertebrate farnesyl-diphosphate farnesyltransferase 1 (FDFT1) [Danio rerio] [NCBI NR] gi\|125847205\|ref\|XP_700647.2\| PREDICTED: similar to Squalene synthetase (SQS) (SS) (Farnesyl-diphosphate farnesyltransferase) (FPP:FPP farnesyltransferase) [Danio rerio] [NCBI NR] PREDICTED: si:ch73-107c13.2 [Danio rerio] [NCBI-RefSeq_D_rerio_na_08-30-2010_reversed.fasta] Uncharacterized protein OS=Danio rerio GN=fdft1 PE=4 SV=1 [uniprot-Danio-rerio-zebrafish-April2015-contam.fasta]
Organism:	Danio rerio
Length:	418 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA]
Biological Process:	lipid biosynthetic process [IEA] biosynthetic process [IEA]
Molecular Function:	transferase activity [IEA] farnesyl-diphosphate farnesyltransferase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIVKSLGHP EEIINLFRYK LGGCRAVMPK LDYDSMSDTL RTCYAYLNQT SRSFAAVIQA  60
   61 LDGELRHAVC IFYLVLRALD TVEDDMSIPL EQKLPLLQDF HTFLYQPEWS FSQSREKDRR 120
  121 VLEDFPTISV EFRNLGQEYR EVISDICHRM GVGMAEFLEK KVSSMKEWDK YCHYVAGLVG 180
  181 IGLSRLFSAS QLEEPEVGRD TELANSMGLF LQKTNIIRDY LEDQQQGRAF WPEEAWSQYA 240
  241 SGLEDLAQPQ HLSSALSCLN LLVTDALRHV PDVMLYLSRL RNQSVFNFCA IPQVMAIATL 300
  301 SACYNNPQVF QGVVKIRKGQ AVTLMMQATN MSAVYSIITQ YSHEILQKVS ISDPSREKTL 360
  361 QILSVIREKS VHEGCVSSRA HHHISPVCVS AAMILAALSW QYLNTTAGPA GGADMQGH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.42

Protein Overview: gi|125847205, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: