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Protein Overview: gi|20148363, gi|...

General Information:
Name(s) found: gi|7543911 [NCBI NR]
gi|20148363 [NCBI NR]
gi|15240627 [NCBI NR]
gi|13899077 [NCBI NR]
gi|11248863 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|7543911|emb|CAB87151.1| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20148363|gb|AAM10072.1| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15240627|ref|NP_196848.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|13899077|gb|AAK48960.1|AF370533_1 ubiquinol--cytochrome-c reductase-like protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T48591 ubiquinol-cytochrome-c reductase (EC 1.10.2.2) Rieske iron-sulfur protein T22N19.90 [similarity] - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    mitochondrial respiratory chain complex III [IDA]
    Biological Process: oxidation reduction [TAS]
    Molecular Function: metal ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVAGRRLF SVSQRSSTAT SFVLSRDHTL SDGGNSSSAS RSVPSADLSS FNSYHRSVIR  60
   61 GFASQVITQG NEIGFGSEVP ATVEAVKTPN SKIVYDDHNH ERYPPGDPSK RAFAYFVLSG 120
  121 GRFVYASVLR LLVLKLIVSM SASKDVLALA SLEVDLGSIE PGTTVTVKWR GKPVFIRRRT 180
  181 EDDIKLANSV DVGSLRDPQE DSVRVKNPEW LIVVGVCTHL GCIPLPNAGD YGGWFCPCHG 240
  241 SHYDISGRIR KGPAPYNLEV PTYSFLEENK LLIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 46.30103 ISP subunit of the mitochondrial cytochrome bc1-complex, watersoluble domain; Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquinol-cytochrome-c reductase activity
    		•  12.5243667017255 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  12.5243667017255 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  9.125468664417 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  6.56410033542443 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  6.40889163290296 bayes_pls_golite062009
  • oxidoreductase activity
    		•  6.05060612159037 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  5.79350583896014 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  5.52425708699797 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.31511996363681 bayes_pls_golite062009
  • electron carrier activity
    		•  5.20213585732279 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.88364619884033 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.66567624087954 bayes_pls_golite062009
  • binding
    		•  1.1265044642485 bayes_pls_golite062009
  • catalytic activity
    		•  0.746741393172769 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  0.71220774812099 bayes_pls_golite062009
  • metal cluster binding
    		•  0.71220774812099 bayes_pls_golite062009
  • protein binding
    		•  0.439276074643623 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.40

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle