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Protein Overview: ERF38_ARATH

General Information:
Name(s) found: ERF38_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|91806317|gb|ABE65886.1| AP2 domain-containing transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|75267810|sp|Q9ZQP3.1|ERF38_ARATH RecName: Full=Ethylene-responsive transcription factor ERF038 [NCBI NR]
  • gi|48479282|gb|AAT44912.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|4263785|gb|AAD15445.1| putative AP2 domain transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||H84771 probable AP2 domain transcription factor [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227471|ref|NP_181113.1| ERF38 (ERF FAMILY PROTEIN 38); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|107738130|gb|ABF83644.1| At2g35700 [Arabidopsis thaliana] [NCBI NR]
  • Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1 [Swiss-Prot]
  • (Q9ZQP3) Putative AP2 domain transcription factor [athaliana3702.FASTAC.txt]
  • putative AP2/EREBP transcription factor [Arabidopsis thaliana]gi|4263785|gb|AAD15445.1| putative AP2 domain transcription factor [Arabidopsis thaliana]gi|25350648|pir||H84771 probable AP2 domain transcription factor [imported] - Arabidopsis thalianagi| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | AP2 domain-containing transcription factor, putative | chr2:15012284-15012868 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AP2 domain-containing transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative AP2/EREBP transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g35700 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative AP2 domain transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATERF38, ERF38 | ERF family protein 38 | chr2:15005205-15005789 FORWARD LENGTH=194 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: [NOT]embryonic development ending in seed dormancy [IGI]
    regulation of transcription, DNA-dependent [ISS]
    secondary cell wall biogenesis [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERDDCRRFQ DSPAQTTERR VKYKPKKKRA KDDDDEKVVS KHPNFRGVRM RQWGKWVSEI  60
   61 REPKKKSRIW LGTFSTAEMA ARAHDVAALA IKGGSAHLNF PELAYHLPRP ASADPKDIQA 120
  121 AAAAAAAAVA IDMDVETSSP SPSPTVTETS SPAMIALSDD AFSDLPDLLL NVNHNIDGFW 180
  181 DSFPYEEPFL SQSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 22.045757 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    2 View Details [110..194] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle