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Protein Overview: KCS5_ARATH

General Information:
Name(s) found: KCS5_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 492 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    endoplasmic reticulum [IDA]
    Biological Process: response to cold [IEP]
    very long-chain fatty acid metabolic process [IDA]
    cuticle development [IDA]
    response to light stimulus [IEP]
    pollen tube development [IMP]
    Molecular Function: fatty acid elongase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFSSSVKL KYVKLGYQYL INNFLTLLLI PVIATVAIEL LRMGPEEILS VLNSLHFELL  60
   61 HILCSSFLII FVSTVYFMSK PRTVYLVDYS CYKPPVTCRV PFSSFMEHSR LILKDNPKSV 120
  121 EFQMRILERS GLGEETCLPP AIHYIPPTPT MESARNEAQM VIFTAMEDLF KNTGLKPKDI 180
  181 DILIVNCSLF SPTPSLSAMI INKYKLRSNI KSYNLSGMGC SASLISVDVA RDLLQVHPNS 240
  241 NAIIISTEII TPNYYKGNER AMLLPNCLFR MGGAAILLSN RRSDRWRAKY KLCHLVRTHR 300
  301 GADDKSYNCV MEQEDKNGNV GINLSKDLMT IAGEALKANI TTIGPLVLPA SEQLLFLSSL 360
  361 IGRKIFNPKW KPYIPDFKQA FEHFCIHAGG RAVIDELQKN LQLSGEHVEA SRMTLHRFGN 420
  421 TSSSSLWYEL SYIEAQGRMK RNDRVWQIAF GSGFKCNSAV WKCNRTIKTP TDGAWSDCIE 480
  481 RYPVFIPEVV KL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..492] PSI-BLAST 86.0 Chalcone synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.14505178497871 bayes_pls_golite062009
  • transferase activity
    		•  1.38158753865981 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.12155569250025 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  1.03445196061197 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.919789551144134 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] synthase activity
    		•  0.115776595790057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle