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Protein Overview: gi|25294085, gi|...

General Information:
Name(s) found: gi|5668784 [NCBI NR]
gi|41619130 [NCBI NR]
gi|25294085 [NCBI NR]
gi|15218730 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|5668784|gb|AAD46010.1|AC007894_8 Strong similarity to M4 protein gb|X90381 from Arabidopsis thaliana and contains 2 PF|00249 Myb-like DNA-binding domains. EST gb|H36793 comes from this gene [NCBI NR]
  • gi|41619130|gb|AAS10030.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||D86470 F21H2.9 protein - Arabidopsis thaliana [NCBI NR]
  • gi|15218730|ref|NP_174726.1| AtMYB93 (myb domain protein 93); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to abscisic acid stimulus [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to salicylic acid stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPCCDEN GLKKGPWTPE EDQKLIDYIH KHGHGSWRAL PKLADLNRCG KSCRLRWTNY  60
   61 LRPDIKRGKF SAEEEQTILH LHSILGNKWS AIATHLQGRT DNEIKNFWNT HLKKKLIQMG 120
  121 IDPVTHQPRT DLFASLPQLI ALANLKDLIE QTSQFSSMQG EAAQLANLQY LQRMFNSSAS 180
  181 LTNNNGNNFS PSSILDIDQH HAMNLLNSMV SWNKDQNPAF DPVLELEAND QNQDLFPLGF 240
  241 IIDQPTQPLQ QQKYHLNNSP SELPSQGDPL LDHVPFSLQT PLNSEDHFID NLVKHPTDHE 300
  301 HEHDDNPSSW VLPSLIDNNP KTVTSSLPHN NPADASSSSS YGGCEAASFY WPDICFDESL 360
  361 MNVIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 42.69897 c-Myb, DNA-binding domain
    2 View Details [119..255] deduced N/A No confident structure predictions are available.
    3 View Details [256..365] MSA 1.151995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle