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Protein Overview: gi|15232873, gi|...

General Information:
Name(s) found: gi|9294312 [NCBI NR]
gi|42740924 [NCBI NR]
gi|15232873 [NCBI NR]
Description(s) found:
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  • gi|9294312|dbj|BAB01483.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|42740924|gb|AAS44558.1| kinesin light chain-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232873|ref|NP_189435.1| kinesin light chain-related [Arabidopsis thaliana] [NCBI NR]
  • (Q9LII8) Similarity to kinesin light chain [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15232873|ref|NP_189435.1| kinesin light chain-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Kinesin light chain-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | kinesin light chain-related | chr3:10381750-10383830 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • kinesin light chain-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:10380513-10382593 REVERSE LENGTH=663 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Kinesin light chain-like protein OS=Arabidopsis thaliana GN=At3g27960 PE=2 SV=1 [ARATH-contam.fasta]
  • Kinesin light chain-like protein OS=Arabidopsis thaliana GN=At3g27960 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 663 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: pollen tube growth [IEP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA  60
   61 SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES NGEGSLSQKK PLSNGKKVAK 120
  121 TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR 180
  181 AVKVFEKCGE GEKQLGLNLV MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL 240
  241 AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ 300
  301 FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS 360
  361 SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK QGKGETHSSV ALVYVRLADL 420
  421 YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA 480
  481 LKIYANAPGQ QNTIAGIEAQ MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL 540
  541 NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE 600
  601 ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR 660
  661 PVY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..532] PSI-BLAST 43.39794 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [533..663] PSI-BLAST 13.0 Designed protein cTPR3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle