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Protein Overview: gi|15241421, gi|...

General Information:
Name(s) found: gi|7573301 [NCBI NR]
gi|15241421 [NCBI NR]
gi|11281885 [NCBI NR]
Description(s) found:
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  • gi|7573301|emb|CAB87619.1| pescadillo-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241421|ref|NP_196956.1| pescadillo-related [Arabidopsis thaliana] [NCBI NR]
  • pir||T48625 pescadillo-like protein - Arabidopsis thaliana [NCBI NR]
  • (Q9LYK7) Pescadillo-like protein [athaliana3702.FASTAC.txt]
  • pescadillo-like protein [Arabidopsis thaliana]gi|11281885|pir||T48625 pescadillo-like protein - Arabidopsis thalianagi|15241421|ref|NP_196956.1| pescadillo-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pescadillo-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pescadillo-related | chr5:4680792-4684333 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • pescadillo-like protein [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • transcription coactivator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | pescadillo-related | chr5:4680789-4684330 REVERSE LENGTH=590 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Pescadillo-like protein OS=Arabidopsis thaliana GN=T15N1_10 PE=4 SV=1 [ARATH-contam.fasta]
  • Pescadillo homolog OS=Arabidopsis thaliana GN=T15N1_10 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 590 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IEA]
    intracellular [IEA][ISS]
    Biological Process: cell proliferation [IEA]
    Molecular Function: transcription coactivator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKHYRPTGK KKEGNAARYM TRSQALKHLQ VNLNLFRRLC IVKGIFPREP KKKIKGNHHT  60
   61 YYHVKDIAFL MHEPLLEKFR EIKTYQKKVK KAKAKKNEEL ARLLLTRQPT YKLDRLIRER 120
  121 YPTFIDALRD LDDCLTMVHL FAVLPASDRE NLEVKRVHNC RRLTHEWQAY ISRSHALRKV 180
  181 FVSVKGIYYQ AEIEGQKITW LTPHAIQQVF TNDVDFGVLL TFLEFYETLL AFINFKLYHS 240
  241 LNVKYPPILD SRLEALAADL YALSRYIDAS SRGMAVEPKV DASFSSQSND REESELRLAQ 300
  301 LQHQLPSSEP GALMHLVADN NKEVEEDEET RVCKSLFKDL KFFLSREVPR ESLQLVITAF 360
  361 GGMVSWEGEG APFKEDDESI THHIIDKPSA GHLYLSRVYV QPQWIYDCVN ARIILPTEKY 420
  421 LVGRIPPPHL SPFVDNEAEG YVPDYAETIK RLQAAARNEV LPLPGVGKED LEDPQNLLYA 480
  481 GVMSRAEEAE AAKNKKKMAA QEKQYHEELK MEINGSKDVV APVLAEGEGE ESVPDAMQIA 540
  541 QEDADMPKVL MSRKKRKLYD AMKISQSRKR SGVEIIEQRK KRLNDTQPSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] MSA 2.036958 View MSA. No confident structure predictions are available.
    2 View Details [121..259] deduced N/A No confident structure predictions are available.
    3 View Details [260..439] PSI-BLAST 39.154902 No description for 2ep8A was found.
    4 View Details [440..590] PSI-BLAST 11.045757 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle