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Protein Overview: MYB98_ARATH

General Information:
Name(s) found: MYB98_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|91806698|gb|ABE66076.1| myb family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|75336839|sp|Q9S7L2.1|MYB98_ARATH RecName: Full=Transcription factor MYB98; AltName: Full=Myb-related protein 98; Short=AtMYB98 [NCBI NR]
  • pir||T04869 transforming protein myb homolog F28A21.180 - Arabidopsis thaliana [NCBI NR]
  • gi|7268671|emb|CAB78879.1| myb-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5823339|gb|AAD53108.1|AF176003_1 putative transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|4539396|emb|CAB37462.1| myb-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234013|ref|NP_193612.1| MYB98 (myb domain protein 98); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1 [Swiss-Prot]
  • (Q9S7L2) MYB-like protein [athaliana3702.FASTAC.txt]
  • myb-like protein [Arabidopsis thaliana]gi|4539396|emb|CAB37462.1| myb-like protein [Arabidopsis thaliana]gi|5823339|gb|AAD53108.1| putative transcription factor [Arabidopsis thaliana]gi|7446175|pir||T04869 transforming protein myb homolog F28A21.180 - [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB98) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtMYB98, MYB98 | MYB98 (myb domain protein 98); DNA binding / transcription factor | chr4:10311079-10312568 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • myb-like protein [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • MYB98; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Transcription factor MYB98 (Myb-related protein 98) (AtMYB98) [nr-271106-contam.fasta]
  • putative transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • myb family transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB98, AtMYB98 | myb domain protein 98 | chr4:10311068-10312557 FORWARD LENGTH=427 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pollen tube guidance [IMP]
    regulation of transcription, DNA-dependent [TAS]
    embryo sac development [IMP]
    regulation of synergid differentiation [IMP]
    Molecular Function: DNA binding [TAS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFVDENGF ASLNQNIFTR DQEHMKEEDF PFEVVDQSKP TSFLQDFHHL DHDHQFDHHH  60
   61 HHGSSSSHPL LSVQTTSSCI NNAPFEHCSY QENMVDFYET KPNLMNHHHF QAVENSYFTR 120
  121 NHHHHQEINL VDEHDDPMDL EQNNMMMMRM IPFDYPPTET FKPMNFVMPD EISCVSADND 180
  181 CYRATSFNKT KPFLTRKLSS SSSSSSWKET KKSTLVKGQW TAEEDRVLIQ LVEKYGLRKW 240
  241 SHIAQVLPGR IGKQCRERWH NHLRPDIKKE TWSEEEDRVL IEFHKEIGNK WAEIAKRLPG 300
  301 RTENSIKNHW NATKRRQFSK RKCRSKYPRP SLLQDYIKSL NMGALMASSV PARGRRRESN 360
  361 NKKKDVVVAV EEKKKEEEVY GQDRIVPECV FTDDFGFNEK LLEEGCSIDS LLDDIPQPDI 420
  421 DAFVHGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] deduced N/A No confident structure predictions are available.
    2 View Details [151..322] PSI-BLAST 45.09691 c-Myb, DNA-binding domain
    3 View Details [323..427] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle