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Protein Overview: gi|25411244, gi|...

General Information:
Name(s) found: gi|4584355 [NCBI NR]
gi|25411244 [NCBI NR]
gi|15225128 [NCBI NR]
Description(s) found:
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  • gi|4584355|gb|AAD25149.1| Ac-like transposase [Arabidopsis thaliana] [NCBI NR]
  • pir||A84478 Ac-like transposase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15225128|ref|NP_178689.1| hAT dimerisation domain-containing protein / transposase-related [Arabidopsis thaliana] [NCBI NR]
  • (Q9SKI5) Ac-like transposase [athaliana3702.FASTAC.txt]
  • Ac-like transposase [Arabidopsis thaliana]gi|25411244|pir||A84478 Ac-like transposase [imported] - Arabidopsis thalianagi|15225128|ref|NP_178689.1| hAT dimerisation domain-containing protein / transposase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 HAT dimerisation domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | hAT dimerisation domain-containing protein / transposase-related | chr2:2580715-2583220 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein dimerization [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Ac-like transposase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | hAT family dimerisation domain | chr2:2580718-2583223 REVERSE LENGTH=582 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Ac-like transposase OS=Arabidopsis thaliana GN=At2g06500 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 582 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVIKENCKR DEKSWYMKKP ENPTISEVIN SDGNNNQQER ADEVDPENKV DNLDEVVQVD  60
   61 ENEFENKQQE QAEVVFEKKK TTSVYNDWRN LSKRLEEHEG SHDHIICMTR WTELESRLQN 120
  121 KTTIDKYVQQ EINKEKIHWR EVLVRIIALV KTLAKNNLAF RGENKKIGED RNGNFLSFIE 180
  181 MIAEFDVVMR EHIRKIGAGE IYSHYLSPKI QNELISMLAQ EIRLMIMKTI RASKYFSIIL 240
  241 DCTPDISHKE QMTILIRCVD ISSTPIKVEE FFLKFLEVND KTGEGLFSTI QEVLIDMELE 300
  301 IDDVRGHGWD IFKEMVKGLT LKSLSQTRWE SHLESVKAIR FQTPEIRDAL LYLAEKTDDP 360
  361 KTRKAMDIEA EFPVKKKKII RRKKHFDHGN MKLSTEEDFR INYFLTLIDQ ALISLESRFE 420
  421 QFQRYEQTFG FLFDLQKLTY ANDENLMASC VNLESSLKHG EHSDIDGADL FMELKVLREV 480
  481 LPNEVTKPIK VLDFLKRVEG CYPNTWISFR ILLTILVSVA SAERSFSKLK LIKNYLRSTM 540
  541 SQDRLNGLAI LSIERAMLEK IDYATVMDDF AGKNASRIIF TQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] MSA 1.116996 View MSA. No confident structure predictions are available.
    2 View Details [134..582] FFAS03 3.46 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.638749293464446 bayes_pls_golite062009
  • hydrolase activity
    		•  0.094903118031094 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle