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Protein Overview: gi|2827527, gi|7...

General Information:
Name(s) found: gi|7484818 [NCBI NR]
gi|7270034 [NCBI NR]
gi|2827527 [NCBI NR]
gi|15235917 [NCBI NR]
Description(s) found:
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  • pir||T04499 auxin-induced protein homolog F8F16.140 - Arabidopsis thaliana [NCBI NR]
  • gi|7270034|emb|CAB79850.1| auxin induced like-protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2827527|emb|CAA16535.1| auxin induced like-protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15235917|ref|NP_194860.1| auxin-responsive protein, putative / small auxin up RNA (SAUR_C) [Arabidopsis thaliana] [NCBI NR]
  • (O49581) Auxin induced like-protein [athaliana3702.FASTAC.txt]
  • auxin induced like-protein [Arabidopsis thaliana]gi|2827527|emb|CAA16535.1| auxin induced like-protein [Arabidopsis thaliana]gi|7484818|pir||T04499 auxin-induced protein homolog F8F16.140 - Arabidopsis thalianagi|15235917|ref|NP_194860.1| auxin-respons [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Auxin-responsive protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | auxin-responsive protein, putative / small auxin up RNA (SAUR_C) | chr4:15193999-15194568 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • auxin induced like-protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • calmodulin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | SAUR-like auxin-responsive protein family | chr4:15193993-15194562 REVERSE LENGTH=189 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Auxin induced like-protein OS=Arabidopsis thaliana GN=AT4g31320 PE=4 SV=1 [ARATH-contam.fasta]
  • Auxin induced like-protein OS=Arabidopsis thaliana GN=At4g31320 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to auxin stimulus [ISS]
    Molecular Function: calmodulin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS  60
   61 GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT EYLSHQAFHV LLREAEEEFG 120
  121 FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS 180
  181 HQPHSPMCR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] Pfam 55.346787 No description for PF02519.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle