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Protein Overview: PAH2_ARATH

General Information:
Name(s) found: PAH2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9758575|dbj|BAB09188.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15239098|ref|NP_199101.1| lipin family protein [Arabidopsis thaliana] [NCBI NR]
  • Phosphatidate phosphatase PAH2 OS=Arabidopsis thaliana GN=PAH2 PE=1 SV=1 [Swiss-Prot]
  • (Q9FMN2) Gb|AAF23287.1 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15239098|ref|NP_199101.1| lipin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Lipin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | lipin family protein | chr5:17202947-17206909 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATPAH2, PAH2 | phosphatidic acid phosphohydrolase 2 | chr5:17185719-17189681 REVERSE LENGTH=930 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Gb|AAF23287.1 OS=Arabidopsis thaliana GN=PAH2 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 930 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    apoplast [IDA]
    Biological Process: lipid metabolic process [IGI]
    cellular response to phosphate starvation [IGI]
    Molecular Function: phosphatidate phosphatase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAVGRIGSY IYRGVGTVSG PFHPFGGAID IIVVEQPDGT FKSSPWYVRF GKFQGVLKNG  60
   61 RNLIRIDVNG VDSGFNMYLA HTGQAYFLRE VEDVVGESES GEVYTLSSGD EAETTSRDDV 120
  121 VDKVKIPLKS RSCNYDSPSP RTGNGKIVGK PGILGYVFGG RSVRESQDCG VERAEIAADL 180
  181 LEVKWSTNID TRKRGKGMSS ESLDGKDYGE STSTSGKSCV EGSSEMLVDS DSILETPLVA 240
  241 SPTLRFLDEK EQDFRESTNV EDYCEEDGSS GVVVENGLCE ASSMVFSVTS EGSGNVEIFV 300
  301 EPRTEALAED AVSGSDLDSK QELLRAPESV EIATLGSADQ ADMGSIGTSQ EGSSTGSPVQ 360
  361 DENKITIKDM HISAGDFEKS QSASGESILQ PEIEEEQFSF SDLDECKPGG NSSVGSSSSD 420
  421 TVKVDGKESY DETKTSPEKG VENTMALSEP INIERKKDIF TDEMERLVGS LPIMRLQNND 480
  481 DMDASPSQPL SQSFDPCFNT SKLDLREDES SSGGLDAESV AESSPKLKAF KHVIANPEVV 540
  541 ELSLCKHLLS EGMGAEAASQ AFNSEKLDME KFASLGPSIL ENDKLVVKIG GCYFPWDAAA 600
  601 PIILGVVSFG TAQVFEPKGM IAVDRNEKPG DVLAQGSGSW KLWPFSLRRS TKEAEASPSG 660
  661 DTAEPEEKQE KSSPRPMKKT VRALTPTSEQ LASLDLKDGM NSVTFTFSTN IVGTQQVDAR 720
  721 IYLWKWNSRI VVSDVDGTIT RSDVLGQFMP LVGIDWSQTG VTHLFSAVKE NGYQLIFLSA 780
  781 RAISQASVTR QFLVNLKQDG KALPDGPVVI SPDGLFPSLF REVIRRAPHE FKIACLEEIR 840
  841 GLFPPEHNPF YAGFGNRDTD EISYLKVGIP RGKIFIINPK GEVAVNRRID TRSYTNLHTL 900
  901 VNRMFPATSS SEPEDFNTWN FWKLPPPSLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] Pfam 61.443697 No description for PF04571.5 was found. No confident structure predictions are available.
    2 View Details [116..290] deduced N/A No confident structure predictions are available.
    3 View Details [291..519] MSA 1.371996 View MSA. No confident structure predictions are available.
    4 View Details [520..590] deduced N/A No confident structure predictions are available.
    5 View Details [591..930] FFAS03 1.27 Polynucleotide kinase, phosphatase domain; Polynucleotide kinase, kinase domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • catalytic activity
    		•  0.909316393878846 bayes_pls_golite062009
  • hydrolase activity
    		•  0.478680038391085 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle